Z. japonica Nagirizaki
Zjn_sc13092.1.g00040.1.sm.mk
Sequence
-
BLAST
| TAIR10 |
AT2G37330.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
282 |
27 |
281 |
2e-96 |
96.8 |
63.1 |
76.2 |
| Subject |
273 |
18 |
271 |
|
| Annot |
| Symbols: ALS3 | aluminum sensitive 3 | chr2:15669190-15670172 FORWARD LENGTH=273 |
| NR |
ref|XP_004960321.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
282 |
3 |
282 |
e-114 |
99.3 |
77.7 |
87.9 |
| Subject |
280 |
2 |
280 |
|
| Annot |
PREDICTED: UPF0014 membrane protein STAR2 [Setaria italica] |
| IRGSP |
Os05t0119000-01_chr05_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
282 |
9 |
281 |
e-106 |
101.1 |
72.7 |
82.3 |
| Subject |
285 |
12 |
283 |
|
| Annot |
|
| Sbicolor |
Sobic.009G023700.1.p|Chr09|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
282 |
6 |
282 |
e-114 |
98.6 |
77.3 |
86.5 |
| Subject |
278 |
2 |
278 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc13092.1.g00040.1.sm.mk |
length: 282 aa. |
| IPR005226 |
Conserved hypothetical protein CHP00245 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03649 |
UPF0014 |
2.1e-53 |
37-266 |
| HMMTigr |
TIGR00245 |
TIGR00245: |
3.8e-56 |
39-275 |
| no_ID |
|
| HMMPanther |
PTHR30028 |
UPF0014 |
3.3e-96 |
13-282 |
| HMMPanther |
PTHR30028:SF0 |
UPF0014 |
3.3e-96 |
13-282 |
| Seg |
seg |
seg |
NA |
36-46 |
Pseudomolecule
No data.
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc13092.1 |
maker_non_over |
exon |
13248 |
13538 |
. |
+ |
. |
ID=Zjn_sc13092.1.g00040.1.sm.mk:exon:1 |
| Zjn_sc13092.1 |
maker_non_over |
exon |
13623 |
14180 |
. |
+ |
. |
ID=Zjn_sc13092.1.g00040.1.sm.mk:exon:2 |