Blast Search
Database:
nucleotide databases protein databases
Pseudomol Genome Transcript CDS PEP
Z. japonica Nagirizaki ZJN.pseudomol ZJN.genome ZJN.transcript ZJN.cds ZJN.pep
Z. matrella Wakaba ZMW.genome ZMW.transcript ZMW.cds ZMW.pep
Z. pacifica Zanpa ZPZ.genome ZPZ.transcript ZPZ.cds ZPZ.pep
Search program:
BLASTN search nucleotide databases using a nucleotide query.
BLASTP search protein databases using a protein query.
BLASTX search protein databases using a translated nucleotide query.
TBLASTN search translated nucleotide databases using a protein query.
TBLASTX search translated nucleotide databases using a translated nucleotide query.
Number of search results:
for which one-line descriptions will be reported:
for which alignments will be reported:
Query sequence: (FASTA format recommended)
Genome sequence cut
Extract Kb upstream and downstream sequences from the hit region.
Advanced settings
Expectation value

Filter query sequence (DUST with blastn, SEG with others)
Perform gapped alignment