Z. japonica Nagirizaki
Zjn_sc04545.1.g00010.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G11170.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 182 4 182 2e-58 245.1 61 70.9
Subject 446 59 217
Annot | Symbols: FAD7, FADD | fatty acid desaturase 7 | chr3:3499959-3502126 FORWARD LENGTH=446
NR ref|XP_004978426.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 182 17 182 2e-59 222.5 72 74.2
Subject 405 21 171
Annot PREDICTED: omega-3 fatty acid desaturase, endoplasmic reticulum-like [Setaria italica]
IRGSP Os12t0104400-01_chr12_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 182 28 182 2e-58 211.5 62.6 69.2
Subject 385 7 154
Annot
Sbicolor Sobic.005G002800.1.p|Chr05|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 182 27 182 2e-59 227.5 69.8 72
Subject 414 27 178
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc04545.1.g00010.1.am.mk length: 182 aa.
IPR005804 Fatty acid desaturase, type 1
method AccNumber shortName E-value location
Biological Process GO:0006629 lipid metabolic process    
HMMPfam PF00487 FA_desaturase 1.5e-11 94-180
IPR021863 Protein of unknown function DUF3474
Molecular Function GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF11960 DUF3474 2.8e-24 13-86
no_ID  
HMMPanther PTHR32100 FAMILY 2.3e-83 8-182
HMMPanther PTHR32100:SF0 SUBFAMILY 2.3e-83 8-182
Seg seg seg NA 12-20
79-92
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc04545.1 maker_non_over exon 119 185 . - . ID=Zjn_sc04545.1.g00010.1.am.mk:exon:3
Zjn_sc04545.1 maker_non_over exon 699 821 . - . ID=Zjn_sc04545.1.g00010.1.am.mk:exon:2
Zjn_sc04545.1 maker_non_over exon 926 1281 . - . ID=Zjn_sc04545.1.g00010.1.am.mk:exon:1

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