Z. japonica Nagirizaki
Zjn_sc03958.1.g00010.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G15210.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 199 11 123 2e-23 111.6 33.7 39.2
Subject 222 8 131
Annot | Symbols: ATERF-4, ERF4, RAP2.5, ATERF4 | ethylene responsive element binding factor 4 | chr3:5121472-5122140 FORWARD LENGTH=222
NR ref|XP_004972568.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 199 25 199 9e-34 102 56.3 62.3
Subject 203 22 203
Annot PREDICTED: ethylene-responsive transcription factor 11-like [Setaria italica]
IRGSP Os04t0610400-00_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 199 29 189 1e-21 111.6 43.2 51.3
Subject 222 25 215
Annot
Sbicolor Sobic.007G077100.1.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 199 25 162 1e-25 109.5 46.7 50.3
Subject 218 24 178
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc03958.1.g00010.1.sm.mk length: 199 aa.
IPR001471 AP2/ERF domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 1.9e-09 30-41
52-68
Gene3D G3DSA:3.30.730.10 no description 1.1e-27 31-86
HMMPfam PF00847 AP2 2.7e-17 31-79
HMMSmart SM00380 DNA-binding 5.7e-29 29-92
ProfileScan PS51032 AP2_ERF 23.354 29-86
IPR016177 DNA-binding domain
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 9e-22 28-89
no_ID  
HMMPanther PTHR31677 FAMILY 2.7e-30 28-131
Seg seg seg NA 6-21
64-82
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc03958.1 maker_non_over exon 701 1300 . - . ID=Zjn_sc03958.1.g00010.1.sm.mk:exon:1

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