Z. japonica Nagirizaki
Zjn_sc03467.1.g00010.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G33070.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 242 8 222 e-107 250.8 75.2 81.4
Subject 607 45 259
Annot | Symbols: | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein | chr4:15952519-15954676 REVERSE LENGTH=607
NR sp|A2Y5L9.1|PDC1_ORYSI Length Start End E-value Length(%) Iden(%) Posi(%)
Query 242 6 222 e-116 250 83.1 87.6
Subject 605 41 257
Annot RecName: Full=Pyruvate decarboxylase 1; Short=PDC gi|125552670|gb|EAY98379.1| hypothetical protein OsI_20290 [Oryza sativa Indica Group]
IRGSP Os05t0469600-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 242 6 222 e-119 250 83.1 87.6
Subject 605 41 257
Annot
Sbicolor Sobic.009G169000.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 242 10 222 e-117 251.7 81.8 86.8
Subject 609 49 261
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc03467.1.g00010.1.am.mk length: 242 aa.
IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain
method AccNumber shortName E-value location
Molecular Function GO:0030976 thiamine pyrophosphate binding    
HMMPfam PF02776 TPP_enzyme_N 1.6e-37 9-175
IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme
HMMPanther PTHR18968:SF4 PYRUVATE 9.8e-106 8-222
no_ID  
Gene3D G3DSA:3.40.50.970 no description 4.5e-78 8-187
HMMPanther PTHR18968 THIAMINE 9.8e-106 8-222
superfamily SSF52518 Thiamin 6.9e-44 7-192
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc03467.1 maker_non_over exon 1 63 . - . ID=Zjn_sc03467.1.g00010.1.am.mk:exon:4
Zjn_sc03467.1 maker_non_over exon 742 820 . - . ID=Zjn_sc03467.1.g00010.1.am.mk:exon:3
Zjn_sc03467.1 maker_non_over exon 918 1081 . - . ID=Zjn_sc03467.1.g00010.1.am.mk:exon:2
Zjn_sc03467.1 maker_non_over exon 1168 1587 . - . ID=Zjn_sc03467.1.g00010.1.am.mk:exon:1

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