Z. japonica Nagirizaki
Zjn_sc02394.1.g00010.1.am.mk
Sequence
-
BLAST
| TAIR10 |
AT3G14440.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
189 |
26 |
165 |
1e-45 |
316.9 |
45 |
56.6 |
| Subject |
599 |
258 |
394 |
|
| Annot |
| Symbols: NCED3, ATNCED3, STO1, SIS7 | nine-cis-epoxycarotenoid dioxygenase 3 | chr3:4831678-4833477 REVERSE LENGTH=599 |
| NR |
gb|EMT30112.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
189 |
26 |
163 |
2e-53 |
229.6 |
56.1 |
62.4 |
| Subject |
434 |
222 |
357 |
|
| Annot |
hypothetical protein F775_13945 [Aegilops tauschii] |
| IRGSP |
Os03t0645900-00_chr03_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
189 |
26 |
163 |
8e-44 |
321.7 |
45 |
55 |
| Subject |
608 |
264 |
398 |
|
| Annot |
|
| Sbicolor |
Sobic.001G155300.1.p|Chr01|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
189 |
26 |
163 |
2e-43 |
323.3 |
44.4 |
55 |
| Subject |
611 |
267 |
401 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc02394.1.g00010.1.am.mk |
length: 189 aa. |
| IPR004294 |
Carotenoid oxygenase |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR10543 |
BETA-CAROTENE |
4.3e-54 |
26-163 |
| HMMPfam |
PF03055 |
RPE65 |
2.1e-33 |
26-165 |
| no_ID |
|
| HMMPanther |
PTHR10543:SF1 |
9-CIS-EPOXYCAROTENOID |
4.3e-54 |
26-163 |
| Seg |
seg |
seg |
NA |
8-14 |
Pseudomolecule
No data.
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc02394.1 |
maker_non_over |
exon |
2 |
571 |
. |
+ |
. |
ID=Zjn_sc02394.1.g00010.1.am.mk:exon:1 |