Z. japonica Nagirizaki
Zjn_sc02173.1.g00010.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G16110.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 178 1 178 2e-28 373 44.4 60.7
Subject 664 64 264
Annot | Symbols: ARR2, RR2 | response regulator 2 | chr4:9112979-9115785 FORWARD LENGTH=664
NR ref|XP_004982951.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 178 1 178 1e-60 186.5 70.8 79.2
Subject 332 46 227
Annot PREDICTED: two-component response regulator EHD1-like [Setaria italica]
IRGSP Os10t0463400-01_chr10_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 178 3 178 6e-51 191.6 59.6 77
Subject 341 49 246
Annot
Sbicolor Sobic.001G227900.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 178 1 178 5e-61 194.9 71.3 81.5
Subject 347 46 242
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc02173.1.g00010.1.sm.mk length: 178 aa.
IPR001005 SANT/Myb domain
method AccNumber shortName E-value location
Molecular Function GO:0003682 chromatin binding    
HMMPfam PF00249 Myb_DNA-binding 1.1e-05 132-178
IPR006447 Myb domain, plants
HMMTigr TIGR01557 myb_SHAQKYF: 1.4e-18 130-178
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 6.9e-19 129-178
superfamily SSF46689 Homeodomain-like 6.8e-12 126-178
IPR011006 CheY-like superfamily
superfamily SSF52172 CheY-like 9.9e-07 9-65
IPR017930 Myb domain
ProfileScan PS51294 HTH_MYB 9.185 127-178
no_ID  
Gene3D G3DSA:3.40.50.2300 no description 3.9e-09 25-79
HMMPanther PTHR24423 TWO 1.1e-16 8-71
HMMPanther PTHR24423:SF35 SUBFAMILY 1.1e-16 8-71
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc02173.1 maker_non_over exon 734 835 . + . ID=Zjn_sc02173.1.g00010.1.sm.mk:exon:1
Zjn_sc02173.1 maker_non_over exon 1002 1388 . + . ID=Zjn_sc02173.1.g00010.1.sm.mk:exon:2
Zjn_sc02173.1 maker_non_over exon 1859 1932 . + . ID=Zjn_sc02173.1.g00010.1.sm.mk:exon:3

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