Z. japonica Nagirizaki
Zjn_sc01557.1.g00010.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G37740.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 226 10 69 2e-20 236.7 18.6 22.1
Subject 535 207 272
Annot | Symbols: AtGRF2, GRF2 | growth-regulating factor 2 | chr4:17725533-17727609 REVERSE LENGTH=535
NR ref|XP_004976689.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 226 11 226 4e-73 165 74.8 81.4
Subject 373 94 329
Annot PREDICTED: growth-regulating factor 3-like [Setaria italica]
IRGSP Os04t0600900-02_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 226 11 226 3e-75 169.9 69.9 78.3
Subject 384 101 343
Annot
Sbicolor Sobic.006G203400.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 226 11 226 3e-69 167.3 69 75.7
Subject 378 100 335
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc01557.1.g00010.1.am.mk length: 226 aa.
IPR014977 WRC
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF08879 WRC 3.9e-22 25-68
no_ID  
HMMPanther PTHR31602 FAMILY 2.9e-35 11-80
Seg seg seg NA 68-86
99-121
125-136
145-155
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc01557.1 maker_non_over exon 3 258 . - . ID=Zjn_sc01557.1.g00010.1.am.mk:exon:3
Zjn_sc01557.1 maker_non_over exon 1544 1928 . - . ID=Zjn_sc01557.1.g00010.1.am.mk:exon:2
Zjn_sc01557.1 maker_non_over exon 2133 2169 . - . ID=Zjn_sc01557.1.g00010.1.am.mk:exon:1

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