Z. japonica Nagirizaki
Zjn_sc01315.1.g00010.1.am.mk
Sequence
-
BLAST
| TAIR10 |
No_hits |
| NR |
dbj|BAD29090.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
257 |
5 |
257 |
2e-35 |
138.5 |
45.9 |
58.8 |
| Subject |
356 |
4 |
301 |
|
| Annot |
hypothetical protein [Oryza sativa Japonica Group] gi|50253193|dbj|BAD29450.1| hypothetical protein [Oryza sativa Japonica Group] gi|125605318|gb|EAZ44354.1| hypothetical protein OsJ_28975 [Oryza sativa Japonica Group] |
| IRGSP |
Os09t0342000-01_chr09_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
257 |
113 |
257 |
2e-22 |
175.1 |
27.2 |
36.6 |
| Subject |
450 |
215 |
393 |
|
| Annot |
|
| Sbicolor |
Sobic.003G060900.1.p|Chr03|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
257 |
113 |
257 |
1e-16 |
145.9 |
25.7 |
33.5 |
| Subject |
375 |
151 |
323 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc01315.1.g00010.1.am.mk |
length: 257 aa. |
| IPR001810 |
F-box domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| superfamily |
SSF81383 |
F-box |
3e-09 |
22-82 |
| no_ID |
|
| Gene3D |
G3DSA:1.20.1280.50 |
no description |
0.00018 |
32-67 |
| HMMPfam |
PF12937 |
F-box-like |
7.1e-06 |
34-74 |
| Seg |
seg |
seg |
NA |
38-48 |
Pseudomolecule
No data.
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc01315.1 |
maker_non_over |
exon |
2 |
240 |
. |
- |
. |
ID=Zjn_sc01315.1.g00010.1.am.mk:exon:3 |
| Zjn_sc01315.1 |
maker_non_over |
exon |
496 |
695 |
. |
- |
. |
ID=Zjn_sc01315.1.g00010.1.am.mk:exon:2 |
| Zjn_sc01315.1 |
maker_non_over |
exon |
993 |
1324 |
. |
- |
. |
ID=Zjn_sc01315.1.g00010.1.am.mk:exon:1 |