Z. japonica Nagirizaki
Zjn_sc00849.1.g00020.1.sm.mk
Sequence
-
BLAST
| TAIR10 |
AT5G58782.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
113 |
27 |
112 |
3e-17 |
255.8 |
37.2 |
47.8 |
| Subject |
289 |
39 |
124 |
|
| Annot |
| Symbols: | Undecaprenyl pyrophosphate synthetase family protein | chr5:23738306-23739430 REVERSE LENGTH=289 |
| NR |
ref|XP_002461923.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
113 |
35 |
108 |
2e-24 |
270.8 |
47.8 |
56.6 |
| Subject |
306 |
40 |
113 |
|
| Annot |
hypothetical protein SORBIDRAFT_02g010690 [Sorghum bicolor] gi|241925300|gb|EER98444.1| hypothetical protein SORBIDRAFT_02g010690 [Sorghum bicolor] |
| IRGSP |
Os01t0857200-01_chr01_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
113 |
27 |
110 |
9e-25 |
261.1 |
46 |
56.6 |
| Subject |
295 |
42 |
125 |
|
| Annot |
|
| Sbicolor |
Sobic.002G123500.1.p|Chr02|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
113 |
35 |
107 |
4e-27 |
251.3 |
46.9 |
55.8 |
| Subject |
284 |
40 |
112 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00849.1.g00020.1.sm.mk |
length: 113 aa. |
| IPR001441 |
Decaprenyl diphosphate synthase-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016765 |
transferase activity, transferring alkyl or aryl (other than methyl) groups |
|
|
| Gene3D |
G3DSA:3.40.1180.10 |
no description |
1.8e-27 |
32-108 |
| HMMPanther |
PTHR10291 |
DEHYDRODOLICHYL |
3e-28 |
33-107 |
| HMMPfam |
PF01255 |
Prenyltransf |
4.5e-20 |
52-108 |
| superfamily |
SSF64005 |
Undecaprenyl |
2.1e-22 |
41-107 |
Pseudomolecule
No data.
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00849.1 |
maker_non_over |
exon |
2635 |
2976 |
. |
- |
. |
ID=Zjn_sc00849.1.g00020.1.sm.mk:exon:1 |