Z. japonica Nagirizaki
Zjn_sc00371.1.g00010.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G01330.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 239 30 192 1e-71 247.7 51.5 60.3
Subject 592 104 266
Annot | Symbols: PDC3 | pyruvate decarboxylase-3 | chr5:132538-134807 REVERSE LENGTH=592
NR ref|XP_006643782.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 239 30 188 4e-79 204.6 61.1 64
Subject 489 1 162
Annot PREDICTED: pyruvate decarboxylase 1-like, partial [Oryza brachyantha]
IRGSP Os01t0160100-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 239 30 188 2e-81 249.8 60.7 63.6
Subject 597 109 270
Annot
Sbicolor Sobic.003G061300.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 239 30 188 1e-76 247.3 60.7 63.2
Subject 591 103 264
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00371.1.g00010.1.sm.mk length: 239 aa.
IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain
method AccNumber shortName E-value location
Molecular Function GO:0030976 thiamine pyrophosphate binding    
HMMPfam PF02776 TPP_enzyme_N 8.8e-12 31-123
IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme
HMMPanther PTHR18968:SF4 PYRUVATE 8e-57 30-186
no_ID  
Gene3D G3DSA:3.40.50.970 no description 7.6e-38 31-136
HMMPanther PTHR18968 THIAMINE 8e-57 30-186
Seg seg seg NA 151-159
202-208
superfamily SSF52518 Thiamin 4.3e-17 31-140
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00371.1 maker_non_over exon 10449 10533 . + . ID=Zjn_sc00371.1.g00010.1.sm.mk:exon:1
Zjn_sc00371.1 maker_non_over exon 10669 10847 . + . ID=Zjn_sc00371.1.g00010.1.sm.mk:exon:2
Zjn_sc00371.1 maker_non_over exon 11241 11404 . + . ID=Zjn_sc00371.1.g00010.1.sm.mk:exon:3
Zjn_sc00371.1 maker_non_over exon 11508 11607 . + . ID=Zjn_sc00371.1.g00010.1.sm.mk:exon:4
Zjn_sc00371.1 maker_non_over exon 12410 12601 . + . ID=Zjn_sc00371.1.g00010.1.sm.mk:exon:5

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