Z. japonica Nagirizaki
Zjn_sc00334.1.g00020.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G15950.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 335 15 331 1e-99 102.7 57.9 69.6
Subject 344 10 322
Annot | Symbols: CCR1, IRX4, ATCCR1 | cinnamoyl coa reductase 1 | chr1:5478855-5481915 FORWARD LENGTH=344
NR ref|XP_012702439.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 335 1 331 e-148 102.1 77.9 85.7
Subject 342 1 328
Annot PREDICTED: cinnamoyl-CoA reductase 1-like [Setaria italica]
IRGSP Os08t0277200-01_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 335 1 335 e-135 102.1 74.9 82.1
Subject 342 1 337
Annot
Sbicolor Sobic.002G146000.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 335 4 335 e-119 103.3 63.3 75.8
Subject 346 5 334
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00334.1.g00020.1.sm.mk length: 335 aa.
IPR001509 NAD-dependent epimerase/dehydratase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0044237 cellular metabolic process    
Molecular Function GO:0050662 coenzyme binding    
HMMPfam PF01370 Epimerase 5.4e-22 18-257
IPR016040 NAD(P)-binding domain
Gene3D G3DSA:3.40.50.720 no description 1.7e-58 17-322
no_ID  
HMMPanther PTHR10366 NAD 3.9e-140 11-331
HMMPanther PTHR10366:SF9 CINNAMOYL-COA 3.9e-140 11-331
superfamily SSF51735 NAD(P)-binding 3.3e-66 14-327
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00334.1 maker_non_over exon 5141 5647 . - . ID=Zjn_sc00334.1.g00020.1.sm.mk:exon:4
Zjn_sc00334.1 maker_non_over exon 5718 5948 . - . ID=Zjn_sc00334.1.g00020.1.sm.mk:exon:3
Zjn_sc00334.1 maker_non_over exon 6325 6446 . - . ID=Zjn_sc00334.1.g00020.1.sm.mk:exon:2
Zjn_sc00334.1 maker_non_over exon 6589 6736 . - . ID=Zjn_sc00334.1.g00020.1.sm.mk:exon:1

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