Z. japonica Nagirizaki
Zjn_sc00264.1.g00010.1.sm.mk
Sequence
-
BLAST
| TAIR10 |
AT2G37330.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
185 |
1 |
185 |
1e-87 |
147.6 |
81.1 |
94.6 |
| Subject |
273 |
88 |
272 |
|
| Annot |
| Symbols: ALS3 | aluminum sensitive 3 | chr2:15669190-15670172 FORWARD LENGTH=273 |
| NR |
ref|XP_004960321.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
185 |
1 |
185 |
9e-96 |
151.4 |
94.1 |
98.4 |
| Subject |
280 |
96 |
280 |
|
| Annot |
PREDICTED: UPF0014 membrane protein STAR2 [Setaria italica] |
| IRGSP |
Os05t0119000-02_chr05_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
185 |
1 |
184 |
3e-92 |
153.5 |
90.3 |
93.5 |
| Subject |
284 |
99 |
282 |
|
| Annot |
|
| Sbicolor |
Sobic.009G023700.1.p|Chr09|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
185 |
1 |
185 |
2e-97 |
150.3 |
93 |
98.4 |
| Subject |
278 |
94 |
278 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00264.1.g00010.1.sm.mk |
length: 185 aa. |
| IPR005226 |
Conserved hypothetical protein CHP00245 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03649 |
UPF0014 |
3e-41 |
2-172 |
| no_ID |
|
| HMMPanther |
PTHR30028 |
UPF0014 |
4.5e-77 |
1-185 |
| HMMPanther |
PTHR30028:SF0 |
UPF0014 |
4.5e-77 |
1-185 |
Pseudomolecule
No data.
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00264.1 |
maker_non_over |
exon |
54 |
299 |
. |
+ |
. |
ID=Zjn_sc00264.1.g00010.1.sm.mk:exon:1 |
| Zjn_sc00264.1 |
maker_non_over |
exon |
544 |
855 |
. |
+ |
. |
ID=Zjn_sc00264.1.g00010.1.sm.mk:exon:2 |