Z. japonica Nagirizaki
Zjn_sc00220.1.g00050.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G37170.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 286 6 286 e-130 99.7 80.8 85.3
Subject 285 4 283
Annot | Symbols: PIP2B, PIP2;2 | plasma membrane intrinsic protein 2 | chr2:15613624-15614791 REVERSE LENGTH=285
NR ref|XP_004956116.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 286 1 286 e-156 100 95.8 98.3
Subject 286 1 286
Annot PREDICTED: aquaporin PIP2-6 [Setaria italica]
IRGSP Os07t0448100-01_chr07_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 286 1 286 e-152 100 91.3 95.8
Subject 286 1 286
Annot
Sbicolor Sobic.002G125700.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 286 1 286 e-158 100 95.8 97.9
Subject 286 1 286
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00220.1.g00050.1.am.mkhc length: 286 aa.
IPR000425 Major intrinsic protein
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00783 MINTRINSICP 4.1e-71 39-58
89-113
126-145
175-193
211-233
251-271
HMMPanther PTHR19139 AQUAPORIN 2.2e-198 6-277
HMMPfam PF00230 MIP 2.8e-85 32-268
HMMTigr TIGR00861 MIP: 1.7e-62 43-268
IPR022357 Major intrinsic protein, conserved site
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
PatternScan PS00221 MIP NA 107-115
IPR023271 Aquaporin-like
Gene3D G3DSA:1.20.1080.10 no description 8.3e-90 15-274
superfamily SSF81338 Aquaporin-like 1e-60 28-272
no_ID  
HMMPanther PTHR19139:SF27 AQUAPORIN-RELATED 2.2e-198 6-277
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00220.1 maker exon 43588 43705 . - . ID=Zjn_sc00220.1.g00050.1.am.mkhc:exon:3
Zjn_sc00220.1 maker exon 43820 43960 . - . ID=Zjn_sc00220.1.g00050.1.am.mkhc:exon:2
Zjn_sc00220.1 maker exon 44063 44671 . - . ID=Zjn_sc00220.1.g00050.1.am.mkhc:exon:1

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