Z. japonica Nagirizaki
Zjn_sc00200.1.g00370.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G51160.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 428 19 365 e-164 87.1 63.3 72
Subject 373 18 365
Annot | Symbols: MUR1, MUR_1, GMD2 | NAD(P)-binding Rossmann-fold superfamily protein | chr3:19007232-19008353 REVERSE LENGTH=373
NR ref|XP_004964482.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 428 1 365 0.0 86.7 79.4 81.8
Subject 371 1 363
Annot PREDICTED: GDP-mannose 4,6 dehydratase 1-like [Setaria italica]
IRGSP Os06t0137700-01_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 428 3 365 0.0 87.6 75.2 79.9
Subject 375 6 367
Annot
Sbicolor Sobic.010G028200.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 428 1 365 0.0 87.4 78.3 81.3
Subject 374 1 366
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00200.1.g00370.1.sm.mk length: 428 aa.
IPR001509 NAD-dependent epimerase/dehydratase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0044237 cellular metabolic process    
Molecular Function GO:0050662 coenzyme binding    
HMMPfam PF01370 Epimerase 1.8e-66 32-280
IPR006368 GDP-mannose 4,6-dehydratase
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0008446 GDP-mannose 4,6-dehydratase activity    
Biological Process GO:0019673 GDP-mannose metabolic process    
HMMTigr TIGR01472 gmd: 9.4e-160 30-354
IPR016040 NAD(P)-binding domain
Gene3D G3DSA:3.40.50.720 no description 1.6e-39 29-219
no_ID  
Gene3D G3DSA:3.90.25.10 no description 2.5e-47 221-362
HMMPanther PTHR10366 NAD 2.8e-216 25-367
HMMPanther PTHR10366:SF149UNCHARACTERIZED PROTEIN 2.8e-216 25-367
Seg seg seg NA 365-387
superfamily SSF51735 NAD(P)-binding 6.7e-73 30-360
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00200.1 maker_non_over exon 154260 155353 . + . ID=Zjn_sc00200.1.g00370.1.sm.mk:exon:1
Zjn_sc00200.1 maker_non_over exon 157280 157463 . + . ID=Zjn_sc00200.1.g00370.1.sm.mk:exon:2
Zjn_sc00200.1 maker_non_over exon 157529 157537 . + . ID=Zjn_sc00200.1.g00370.1.sm.mk:exon:3

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