Z. japonica Nagirizaki
Zjn_sc00200.1.g00130.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G45300.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 459 53 459 0.0 113.3 73.4 80.2
Subject 520 114 520
Annot | Symbols: | RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta | chr2:18677518-18679868 FORWARD LENGTH=520
NR ref|XP_004964446.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 459 1 459 0.0 111.3 94.6 96.1
Subject 511 4 511
Annot PREDICTED: 3-phosphoshikimate 1-carboxyvinyltransferase 2-like [Setaria italica]
IRGSP Os06t0133900-01_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 459 138 459 e-179 70.2 68 69.9
Subject 322 1 322
Annot
Sbicolor Sobic.010G023800.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 459 53 459 0.0 110.2 86.5 87.4
Subject 506 101 506
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00200.1.g00130.1.sm.mkhc length: 459 aa.
IPR001986 Enolpyruvate transferase domain
method AccNumber shortName E-value location
Molecular Function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups    
Gene3D G3DSA:3.65.10.10 no description 1.3e-74 52-262
263-456
HMMPfam PF00275 EPSP_synthase 2.6e-132 52-453
IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase
Molecular Function GO:0003866 3-phosphoshikimate 1-carboxyvinyltransferase activity    
HAMAP MF_00210 EPSP_synth 30.165 17-459
HMMPIR PIRSF000505 3-phosphoshikimate 2.6e-139 33-458
HMMTigr TIGR01356 aroA: 2.3e-132 52-458
IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta
Molecular Function GO:0003824 catalytic activity    
superfamily SSF55205 EPT/RTPC-like 6.1e-109 53-456
IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site
PatternScan PS00104 EPSP_SYNTHASE_1 NA 110-124
PatternScan PS00885 EPSP_SYNTHASE_2 NA 371-389
no_ID  
HMMPanther PTHR21090 AROM/DEHYDROQUINATE 9.6e-304 53-457
HMMPanther PTHR21090:SF3 3-PHOSPHOSHIKIMATE 9.6e-304 53-457
Seg seg seg NA 2-20
123-134
197-208
281-293
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00200.1 maker exon 42753 42908 . + . ID=Zjn_sc00200.1.g00130.1.sm.mkhc:exon:1
Zjn_sc00200.1 maker exon 43343 43587 . + . ID=Zjn_sc00200.1.g00130.1.sm.mkhc:exon:2
Zjn_sc00200.1 maker exon 43695 43848 . + . ID=Zjn_sc00200.1.g00130.1.sm.mkhc:exon:3
Zjn_sc00200.1 maker exon 44088 44302 . + . ID=Zjn_sc00200.1.g00130.1.sm.mkhc:exon:4
Zjn_sc00200.1 maker exon 44779 44896 . + . ID=Zjn_sc00200.1.g00130.1.sm.mkhc:exon:5
Zjn_sc00200.1 maker exon 45130 45340 . + . ID=Zjn_sc00200.1.g00130.1.sm.mkhc:exon:6
Zjn_sc00200.1 maker exon 45430 45491 . + . ID=Zjn_sc00200.1.g00130.1.sm.mkhc:exon:7
Zjn_sc00200.1 maker exon 45602 46109 . + . ID=Zjn_sc00200.1.g00130.1.sm.mkhc:exon:8
Zjn_sc00200.1 maker exon 46187 46346 . + . ID=Zjn_sc00200.1.g00130.1.sm.mkhc:exon:9

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