Z. japonica Nagirizaki
Zjn_sc00200.1.g00110.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G45290.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 633 1 633 0.0 117.1 85.6 92.6
Subject 741 108 740
Annot | Symbols: | Transketolase | chr2:18672737-18675589 FORWARD LENGTH=741
NR ref|XP_004964445.2| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 633 1 633 0.0 100 94.9 97.5
Subject 633 1 633
Annot PREDICTED: transketolase, chloroplastic [Setaria italica]
IRGSP Os06t0133800-01_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 633 1 633 0.0 107.1 92.4 96.5
Subject 678 46 678
Annot
Sbicolor Sobic.010G023700.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 633 1 633 0.0 116.9 95.3 97
Subject 740 108 740
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00200.1.g00110.1.am.mkhc length: 633 aa.
IPR005474 Transketolase, N-terminal
method AccNumber shortName E-value location
HMMPfam PF00456 Transketolase_N 1.2e-134 1-307
IPR005475 Transketolase-like, pyrimidine-binding domain
HMMPfam PF02779 Transket_pyr 3e-44 325-495
HMMSmart SM00861 Transketolase, 1.8e-59 324-496
IPR005476 Transketolase, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF02780 Transketolase_C 2.1e-08 520-626
IPR005478 Transketolase, bacterial-like
Molecular Function GO:0004802 transketolase activity    
HMMTigr TIGR00232 tktlase_bact: 1e-268 1-632
IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
superfamily SSF52922 TK 4.5e-45 498-633
IPR015941 Transketolase-like, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.920 no description 2.7e-42 507-632
no_ID  
Gene3D G3DSA:3.40.50.970 no description 6.8e-72 1-293
303-502
HMMPanther PTHR11624 DEHYDROGENASE 0 1-633
HMMPanther PTHR11624:SF1 TRANSKETOLASE 0 1-633
superfamily SSF52518 Thiamin 7.4e-68 1-307
302-498
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00200.1 maker exon 35885 37584 . - . ID=Zjn_sc00200.1.g00110.1.am.mkhc:exon:7
Zjn_sc00200.1 maker exon 37665 37818 . - . ID=Zjn_sc00200.1.g00110.1.am.mkhc:exon:6
Zjn_sc00200.1 maker exon 37898 38046 . - . ID=Zjn_sc00200.1.g00110.1.am.mkhc:exon:5
Zjn_sc00200.1 maker exon 38131 38413 . - . ID=Zjn_sc00200.1.g00110.1.am.mkhc:exon:4
Zjn_sc00200.1 maker exon 38500 38605 . - . ID=Zjn_sc00200.1.g00110.1.am.mkhc:exon:3
Zjn_sc00200.1 maker exon 38705 38795 . - . ID=Zjn_sc00200.1.g00110.1.am.mkhc:exon:2
Zjn_sc00200.1 maker exon 39200 39479 . - . ID=Zjn_sc00200.1.g00110.1.am.mkhc:exon:1

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