Z. japonica Nagirizaki
Zjn_sc00200.1.g00080.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G32900.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1010 444 1010 0.0 60.4 36.6 42
Subject 610 78 610
Annot | Symbols: | UDP-Glycosyltransferase superfamily protein | chr1:11920582-11923506 REVERSE LENGTH=610
NR gb|ABU98330.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1010 376 1010 0.0 59.7 52.2 54.7
Subject 603 1 603
Annot granule-bound starch synthase I [Austrostipa aristiglumis]
IRGSP Os06t0133000-01_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1010 379 1010 0.0 60.3 50.5 53.5
Subject 609 9 609
Annot
Sbicolor Sobic.010G022600.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1010 379 1010 0.0 60.2 49.9 53
Subject 608 9 608
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00200.1.g00080.1.am.mk length: 1010 aa.
IPR001296 Glycosyl transferase, family 1
method AccNumber shortName E-value location
Biological Process GO:0009058 biosynthetic process    
HMMPfam PF00534 Glycos_transf_1 6.3e-09 789-920
IPR011835 Glycogen/starch synthase, ADP-glucose type
Molecular Function GO:0009011 starch synthase activity    
Biological Process GO:0009250 glucan biosynthetic process    
HAMAP MF_00484 Glycogen_synth 31.326 452-985
HMMTigr TIGR02095 glgA: 5.8e-140 452-982
IPR013534 Starch synthase, catalytic domain
HMMPfam PF08323 Glyco_transf_5 1.4e-72 453-713
no_ID  
Gene3D G3DSA:3.40.50.2000 no description 1.3e-64 725-967
HMMPanther PTHR12526 GLYCOSYLTRANSFERASE 2e-156 451-985
HMMPanther PTHR12526:SF17 STARCH 2e-156 451-985
Seg seg seg NA 70-96
206-220
223-239
243-255
292-304
317-329
468-477
superfamily SSF53756 UDP-Glycosyltransferase/glycogen 1.4e-91 451-985
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00200.1 maker_non_over exon 28343 28634 . + . ID=Zjn_sc00200.1.g00080.1.am.mk:exon:1
Zjn_sc00200.1 maker_non_over exon 28902 28980 . + . ID=Zjn_sc00200.1.g00080.1.am.mk:exon:2
Zjn_sc00200.1 maker_non_over exon 29030 29741 . + . ID=Zjn_sc00200.1.g00080.1.am.mk:exon:3
Zjn_sc00200.1 maker_non_over exon 30206 30568 . + . ID=Zjn_sc00200.1.g00080.1.am.mk:exon:4
Zjn_sc00200.1 maker_non_over exon 30656 30736 . + . ID=Zjn_sc00200.1.g00080.1.am.mk:exon:5
Zjn_sc00200.1 maker_non_over exon 30819 30917 . + . ID=Zjn_sc00200.1.g00080.1.am.mk:exon:6
Zjn_sc00200.1 maker_non_over exon 31002 31091 . + . ID=Zjn_sc00200.1.g00080.1.am.mk:exon:7
Zjn_sc00200.1 maker_non_over exon 31216 31279 . + . ID=Zjn_sc00200.1.g00080.1.am.mk:exon:8
Zjn_sc00200.1 maker_non_over exon 31373 31473 . + . ID=Zjn_sc00200.1.g00080.1.am.mk:exon:9
Zjn_sc00200.1 maker_non_over exon 31572 31936 . + . ID=Zjn_sc00200.1.g00080.1.am.mk:exon:10
Zjn_sc00200.1 maker_non_over exon 32000 32225 . + . ID=Zjn_sc00200.1.g00080.1.am.mk:exon:11
Zjn_sc00200.1 maker_non_over exon 32323 32550 . + . ID=Zjn_sc00200.1.g00080.1.am.mk:exon:12
Zjn_sc00200.1 maker_non_over exon 32644 32730 . + . ID=Zjn_sc00200.1.g00080.1.am.mk:exon:13
Zjn_sc00200.1 maker_non_over exon 32851 32979 . + . ID=Zjn_sc00200.1.g00080.1.am.mk:exon:14
Zjn_sc00200.1 maker_non_over exon 33064 33180 . + . ID=Zjn_sc00200.1.g00080.1.am.mk:exon:15

Top