Z. japonica Nagirizaki
Zjn_sc00194.1.g00180.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT5G08170.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
381 |
9 |
379 |
e-150 |
100.5 |
65.4 |
75.6 |
| Subject |
383 |
8 |
377 |
|
| Annot |
| Symbols: EMB1873, ATAIH | porphyromonas-type peptidyl-arginine deiminase family protein | chr5:2628663-2631047 REVERSE LENGTH=383 |
| NR |
ref|XP_004975894.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
381 |
1 |
378 |
0.0 |
97.9 |
83.5 |
92.1 |
| Subject |
373 |
2 |
373 |
|
| Annot |
PREDICTED: agmatine deiminase [Setaria italica] |
| IRGSP |
Os04t0466600-01_chr04_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
381 |
2 |
378 |
0.0 |
99.7 |
82.7 |
87.4 |
| Subject |
380 |
4 |
380 |
|
| Annot |
|
| Sbicolor |
Sobic.006G111700.1.p|Chr06|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
381 |
1 |
379 |
0.0 |
98.4 |
83.7 |
91.6 |
| Subject |
375 |
1 |
375 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00194.1.g00180.1.sm.mkhc |
length: 381 aa. |
| IPR007466 |
Peptidyl-arginine deiminase, Porphyromonas-type |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004668 |
protein-arginine deiminase activity |
|
|
| Biological Process |
GO:0009446 |
putrescine biosynthetic process |
|
|
| HMMPfam |
PF04371 |
PAD_porph |
1.4e-134 |
14-374 |
| IPR017754 |
Agmatine deiminase |
| Biological Process |
GO:0009446 |
putrescine biosynthetic process |
|
|
| Molecular Function |
GO:0047632 |
agmatine deiminase activity |
|
|
| HAMAP |
MF_01841 |
Agmatine_deimin |
53.227 |
7-375 |
| HMMTigr |
TIGR03380 |
agmatine_aguA: |
1e-161 |
8-374 |
| no_ID |
|
| Gene3D |
G3DSA:3.75.10.10 |
no description |
5.6e-150 |
5-375 |
| HMMPanther |
PTHR31377 |
FAMILY |
5e-154 |
1-374 |
| HMMPanther |
PTHR31377:SF0 |
SUBFAMILY |
5e-154 |
1-374 |
| superfamily |
SSF55909 |
Pentein |
2.7e-125 |
6-378 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 11 | 5773041 | 5776763 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00194.1 |
maker |
exon |
77090 |
77515 |
. |
- |
. |
ID=Zjn_sc00194.1.g00180.1.sm.mkhc:exon:10 |
| Zjn_sc00194.1 |
maker |
exon |
77649 |
77801 |
. |
- |
. |
ID=Zjn_sc00194.1.g00180.1.sm.mkhc:exon:9 |
| Zjn_sc00194.1 |
maker |
exon |
77904 |
78139 |
. |
- |
. |
ID=Zjn_sc00194.1.g00180.1.sm.mkhc:exon:8 |
| Zjn_sc00194.1 |
maker |
exon |
78241 |
78375 |
. |
- |
. |
ID=Zjn_sc00194.1.g00180.1.sm.mkhc:exon:7 |
| Zjn_sc00194.1 |
maker |
exon |
78469 |
78547 |
. |
- |
. |
ID=Zjn_sc00194.1.g00180.1.sm.mkhc:exon:6 |
| Zjn_sc00194.1 |
maker |
exon |
78648 |
78703 |
. |
- |
. |
ID=Zjn_sc00194.1.g00180.1.sm.mkhc:exon:5 |
| Zjn_sc00194.1 |
maker |
exon |
78974 |
79058 |
. |
- |
. |
ID=Zjn_sc00194.1.g00180.1.sm.mkhc:exon:4 |
| Zjn_sc00194.1 |
maker |
exon |
79130 |
79225 |
. |
- |
. |
ID=Zjn_sc00194.1.g00180.1.sm.mkhc:exon:3 |
| Zjn_sc00194.1 |
maker |
exon |
79308 |
79421 |
. |
- |
. |
ID=Zjn_sc00194.1.g00180.1.sm.mkhc:exon:2 |
| Zjn_sc00194.1 |
maker |
exon |
80720 |
80812 |
. |
- |
. |
ID=Zjn_sc00194.1.g00180.1.sm.mkhc:exon:1 |