Z. japonica Nagirizaki
Zjn_sc00194.1.g00170.1.sm.mk
Sequence
-
BLAST
| TAIR10 |
AT5G08170.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
396 |
9 |
394 |
e-147 |
96.7 |
62.9 |
74 |
| Subject |
383 |
8 |
377 |
|
| Annot |
| Symbols: EMB1873, ATAIH | porphyromonas-type peptidyl-arginine deiminase family protein | chr5:2628663-2631047 REVERSE LENGTH=383 |
| NR |
ref|XP_004975894.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
396 |
1 |
393 |
0.0 |
94.2 |
80.8 |
86.9 |
| Subject |
373 |
2 |
373 |
|
| Annot |
PREDICTED: agmatine deiminase [Setaria italica] |
| IRGSP |
Os04t0466600-01_chr04_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
396 |
4 |
393 |
e-178 |
96 |
77 |
83.8 |
| Subject |
380 |
6 |
380 |
|
| Annot |
|
| Sbicolor |
Sobic.006G111700.1.p|Chr06|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
396 |
1 |
394 |
0.0 |
94.7 |
79.8 |
88.4 |
| Subject |
375 |
1 |
375 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00194.1.g00170.1.sm.mk |
length: 396 aa. |
| IPR007466 |
Peptidyl-arginine deiminase, Porphyromonas-type |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004668 |
protein-arginine deiminase activity |
|
|
| Biological Process |
GO:0009446 |
putrescine biosynthetic process |
|
|
| HMMPfam |
PF04371 |
PAD_porph |
9.6e-126 |
52-389 |
| IPR017754 |
Agmatine deiminase |
| Biological Process |
GO:0009446 |
putrescine biosynthetic process |
|
|
| Molecular Function |
GO:0047632 |
agmatine deiminase activity |
|
|
| HAMAP |
MF_01841 |
Agmatine_deimin |
51.438 |
7-390 |
| HMMTigr |
TIGR03380 |
agmatine_aguA: |
7.1e-145 |
52-389 |
| no_ID |
|
| Gene3D |
G3DSA:3.75.10.10 |
no description |
2.2e-147 |
5-390 |
| HMMPanther |
PTHR31377 |
FAMILY |
3e-151 |
1-390 |
| HMMPanther |
PTHR31377:SF0 |
SUBFAMILY |
3e-151 |
1-390 |
| superfamily |
SSF55909 |
Pentein |
3.4e-118 |
6-393 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 11 | 5768154 | 5772118 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00194.1 |
maker_non_over |
exon |
72203 |
72301 |
. |
- |
. |
ID=Zjn_sc00194.1.g00170.1.sm.mk:exon:11 |
| Zjn_sc00194.1 |
maker_non_over |
exon |
72417 |
72572 |
. |
- |
. |
ID=Zjn_sc00194.1.g00170.1.sm.mk:exon:10 |
| Zjn_sc00194.1 |
maker_non_over |
exon |
72670 |
72905 |
. |
- |
. |
ID=Zjn_sc00194.1.g00170.1.sm.mk:exon:9 |
| Zjn_sc00194.1 |
maker_non_over |
exon |
73002 |
73136 |
. |
- |
. |
ID=Zjn_sc00194.1.g00170.1.sm.mk:exon:8 |
| Zjn_sc00194.1 |
maker_non_over |
exon |
73232 |
73310 |
. |
- |
. |
ID=Zjn_sc00194.1.g00170.1.sm.mk:exon:7 |
| Zjn_sc00194.1 |
maker_non_over |
exon |
73400 |
73443 |
. |
- |
. |
ID=Zjn_sc00194.1.g00170.1.sm.mk:exon:6 |
| Zjn_sc00194.1 |
maker_non_over |
exon |
73872 |
73950 |
. |
- |
. |
ID=Zjn_sc00194.1.g00170.1.sm.mk:exon:5 |
| Zjn_sc00194.1 |
maker_non_over |
exon |
74042 |
74137 |
. |
- |
. |
ID=Zjn_sc00194.1.g00170.1.sm.mk:exon:4 |
| Zjn_sc00194.1 |
maker_non_over |
exon |
74244 |
74357 |
. |
- |
. |
ID=Zjn_sc00194.1.g00170.1.sm.mk:exon:3 |
| Zjn_sc00194.1 |
maker_non_over |
exon |
74388 |
74443 |
. |
- |
. |
ID=Zjn_sc00194.1.g00170.1.sm.mk:exon:2 |
| Zjn_sc00194.1 |
maker_non_over |
exon |
76071 |
76167 |
. |
- |
. |
ID=Zjn_sc00194.1.g00170.1.sm.mk:exon:1 |