Z. japonica Nagirizaki
Zjn_sc00184.1.g00280.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G54080.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 452 10 440 0.0 102 74.1 83.8
Subject 461 13 441
Annot | Symbols: HGO | homogentisate 1,2-dioxygenase | chr5:21945920-21948070 FORWARD LENGTH=461
NR ref|XP_002437662.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 452 7 442 0.0 103.8 90.5 92.3
Subject 469 18 452
Annot hypothetical protein SORBIDRAFT_10g000360 [Sorghum bicolor] gi|241915885|gb|EER89029.1| hypothetical protein SORBIDRAFT_10g000360 [Sorghum bicolor]
IRGSP Os06t0103300-01_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 452 7 450 0.0 104 87.2 90
Subject 470 21 466
Annot
Sbicolor Sobic.010G001600.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 452 7 442 0.0 103.8 90.5 92.3
Subject 469 18 452
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00184.1.g00280.1.sm.mkhc length: 452 aa.
IPR005708 Homogentisate 1,2-dioxygenase
method AccNumber shortName E-value location
Molecular Function GO:0004411 homogentisate 1,2-dioxygenase activity    
Biological Process GO:0006559 L-phenylalanine catabolic process    
Biological Process GO:0006570 tyrosine metabolic process    
Biological Process GO:0055114 oxidation-reduction process    
HMMPanther PTHR11056 HOMOGENTISATE 2e-254 1-452
HMMPfam PF04209 HgmA 1.3e-183 10-439
HMMTigr TIGR01015 hmgA: 2.3e-190 7-439
IPR011051 RmlC-like cupin domain
superfamily SSF51182 RmlC-like 8.8e-158 6-445
IPR014710 RmlC-like jelly roll fold
Gene3D G3DSA:2.60.120.10 no description 3.5e-58 203-228
253-409
no_ID  
HMMPanther PTHR11056:SF0 HOMOGENTISATE 2e-254 1-452
Pseudomolecule
Chromosome Start End Strand
198526387646-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00184.1 maker exon 131699 131886 . + . ID=Zjn_sc00184.1.g00280.1.sm.mkhc:exon:1
Zjn_sc00184.1 maker exon 131972 132208 . + . ID=Zjn_sc00184.1.g00280.1.sm.mkhc:exon:2
Zjn_sc00184.1 maker exon 132325 132404 . + . ID=Zjn_sc00184.1.g00280.1.sm.mkhc:exon:3
Zjn_sc00184.1 maker exon 132641 132808 . + . ID=Zjn_sc00184.1.g00280.1.sm.mkhc:exon:4
Zjn_sc00184.1 maker exon 132893 133068 . + . ID=Zjn_sc00184.1.g00280.1.sm.mkhc:exon:5
Zjn_sc00184.1 maker exon 133164 133233 . + . ID=Zjn_sc00184.1.g00280.1.sm.mkhc:exon:6
Zjn_sc00184.1 maker exon 133316 133470 . + . ID=Zjn_sc00184.1.g00280.1.sm.mkhc:exon:7
Zjn_sc00184.1 maker exon 133550 134082 . + . ID=Zjn_sc00184.1.g00280.1.sm.mkhc:exon:8

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