Z. japonica Nagirizaki
Zjn_sc00184.1.g00150.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G19390.3 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 527 45 144 4e-27 156 11.4 13.7
Subject 822 106 205
Annot | Symbols: | Rho GTPase activation protein (RhoGAP) with PH domain | chr5:6531906-6538069 FORWARD LENGTH=822
NR gb|ABF95052.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 527 45 498 4e-87 114.2 43.3 55.6
Subject 602 141 586
Annot PH domain containing protein, expressed [Oryza sativa Japonica Group]
IRGSP Os03t0209800-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 527 278 510 1e-44 163.2 22 27.9
Subject 860 622 856
Annot
Sbicolor Sobic.001G432200.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 527 45 146 5e-41 157.3 15.2 16.7
Subject 829 144 245
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00184.1.g00150.1.sm.mk length: 527 aa.
IPR025757 Ternary complex factor MIP1, leucine-zipper
method AccNumber shortName E-value location
HMMPfam PF14389 Lzipper-MIP1 1.9e-06 280-325
no_ID  
Coil coil coiled-coil NA 45-66
275-296
472-493
Seg seg seg NA 171-184
230-250
503-521
Pseudomolecule
Chromosome Start End Strand
19143048150382+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00184.1 maker_non_over exon 68963 69163 . - . ID=Zjn_sc00184.1.g00150.1.sm.mk:exon:13
Zjn_sc00184.1 maker_non_over exon 69259 69543 . - . ID=Zjn_sc00184.1.g00150.1.sm.mk:exon:12
Zjn_sc00184.1 maker_non_over exon 69596 69817 . - . ID=Zjn_sc00184.1.g00150.1.sm.mk:exon:11
Zjn_sc00184.1 maker_non_over exon 70424 70488 . - . ID=Zjn_sc00184.1.g00150.1.sm.mk:exon:10
Zjn_sc00184.1 maker_non_over exon 71339 71375 . - . ID=Zjn_sc00184.1.g00150.1.sm.mk:exon:9
Zjn_sc00184.1 maker_non_over exon 71502 71720 . - . ID=Zjn_sc00184.1.g00150.1.sm.mk:exon:8
Zjn_sc00184.1 maker_non_over exon 71840 71906 . - . ID=Zjn_sc00184.1.g00150.1.sm.mk:exon:7
Zjn_sc00184.1 maker_non_over exon 72734 72789 . - . ID=Zjn_sc00184.1.g00150.1.sm.mk:exon:6
Zjn_sc00184.1 maker_non_over exon 73071 73117 . - . ID=Zjn_sc00184.1.g00150.1.sm.mk:exon:5
Zjn_sc00184.1 maker_non_over exon 73251 73355 . - . ID=Zjn_sc00184.1.g00150.1.sm.mk:exon:4
Zjn_sc00184.1 maker_non_over exon 73819 73963 . - . ID=Zjn_sc00184.1.g00150.1.sm.mk:exon:3
Zjn_sc00184.1 maker_non_over exon 75851 75949 . - . ID=Zjn_sc00184.1.g00150.1.sm.mk:exon:2
Zjn_sc00184.1 maker_non_over exon 76262 76297 . - . ID=Zjn_sc00184.1.g00150.1.sm.mk:exon:1

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