Z. japonica Nagirizaki
Zjn_sc00180.1.g00110.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G31230.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 252 52 250 2e-33 96.4 35.3 47.2
Subject 243 57 242
Annot | Symbols: ATERF15, ERF15 | ethylene-responsive element binding factor 15 | chr2:13306676-13307407 REVERSE LENGTH=243
NR ref|XP_004979115.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 252 1 252 5e-44 106.7 56 68.3
Subject 269 1 267
Annot PREDICTED: ethylene-responsive transcription factor ERF094-like [Setaria italica]
IRGSP Os03t0860100-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 252 86 246 8e-35 89.3 32.5 39.3
Subject 225 75 206
Annot
Sbicolor Sobic.002G069200.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 252 91 249 2e-36 159.5 35.3 40.5
Subject 402 232 394
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00180.1.g00110.1.sm.mk length: 252 aa.
IPR001471 AP2/ERF domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 1.8e-08 91-102
114-130
Gene3D G3DSA:3.30.730.10 no description 5e-27 91-149
HMMPfam PF00847 AP2 3.3e-14 91-140
HMMSmart SM00380 DNA-binding 4.3e-30 90-154
ProfileScan PS51032 AP2_ERF 21.641 90-148
IPR016177 DNA-binding domain
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 1.6e-22 89-151
no_ID  
HMMPanther PTHR31190 FAMILY 3.1e-20 88-170
HMMPanther PTHR31190:SF0 SUBFAMILY 3.1e-20 88-170
Seg seg seg NA 7-19
172-183
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00180.1 maker_non_over exon 93367 94125 . - . ID=Zjn_sc00180.1.g00110.1.sm.mk:exon:1

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