Z. japonica Nagirizaki
Zjn_sc00180.1.g00050.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G31230.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 255 90 247 1e-34 95.3 33.7 40.8
Subject 243 83 239
Annot | Symbols: ATERF15, ERF15 | ethylene-responsive element binding factor 15 | chr2:13306676-13307407 REVERSE LENGTH=243
NR ref|XP_004959050.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 255 82 250 6e-42 118.8 38 44.3
Subject 303 145 301
Annot PREDICTED: ethylene-responsive transcription factor 1-like [Setaria italica]
IRGSP Os09t0572000-01_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 255 93 242 1e-33 93.3 34.9 38.8
Subject 238 87 206
Annot
Sbicolor Sobic.002G069200.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 255 93 252 3e-39 157.6 35.3 42
Subject 402 232 396
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00180.1.g00050.1.am.mk length: 255 aa.
IPR001471 AP2/ERF domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 7.8e-08 93-104
116-132
Gene3D G3DSA:3.30.730.10 no description 1.9e-26 93-151
HMMPfam PF00847 AP2 2.5e-14 93-142
HMMSmart SM00380 DNA-binding 4.9e-30 92-156
ProfileScan PS51032 AP2_ERF 21.377 92-150
IPR016177 DNA-binding domain
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 2.8e-22 91-153
no_ID  
HMMPanther PTHR31677 FAMILY 3.5e-18 82-151
Seg seg seg NA 51-65
128-140
176-193
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00180.1 maker_non_over exon 47024 47791 . - . ID=Zjn_sc00180.1.g00050.1.am.mk:exon:1

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