Z. japonica Nagirizaki
Zjn_sc00179.1.g00290.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G37090.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 593 145 455 1e-74 59.2 26 36.3
Subject 351 3 351
Annot | Symbols: IRX9 | Nucleotide-diphospho-sugar transferases superfamily protein | chr2:15587671-15589223 REVERSE LENGTH=351
NR emb|CAI93177.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 593 136 449 e-151 62.9 47.4 49.6
Subject 373 1 371
Annot glycosyltransferase [Saccharum officinarum]
IRGSP Os05t0123100-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 593 136 464 e-135 62.6 47.2 50.1
Subject 371 1 371
Annot
Sbicolor Sobic.009G026100.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 593 150 449 e-134 63.4 44.9 46.2
Subject 376 19 374
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00179.1.g00290.1.am.mk length: 593 aa.
IPR005027 Glycosyl transferase, family 43
method AccNumber shortName E-value location
Molecular Function GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity    
Cellular Component GO:0016020 membrane    
HMMPanther PTHR10896 GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 2e-120 137-447
HMMPfam PF03360 Glyco_transf_43 5.7e-44 223-445
no_ID  
Gene3D G3DSA:3.90.550.10 no description 5.2e-64 211-448
HMMPanther PTHR10896:SF1 BETA-1,3-GLUCURONYLTRANSFERASE 2e-120 137-447
Seg seg seg NA 63-75
85-102
135-146
197-209
230-251
superfamily SSF53448 Nucleotide-diphospho-sugar 1.8e-61 202-471
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00179.1 maker_non_over exon 186025 186106 . + . ID=Zjn_sc00179.1.g00290.1.am.mk:exon:1
Zjn_sc00179.1 maker_non_over exon 186181 186496 . + . ID=Zjn_sc00179.1.g00290.1.am.mk:exon:2
Zjn_sc00179.1 maker_non_over exon 186632 186890 . + . ID=Zjn_sc00179.1.g00290.1.am.mk:exon:3
Zjn_sc00179.1 maker_non_over exon 187167 187462 . + . ID=Zjn_sc00179.1.g00290.1.am.mk:exon:4
Zjn_sc00179.1 maker_non_over exon 189942 190227 . + . ID=Zjn_sc00179.1.g00290.1.am.mk:exon:5
Zjn_sc00179.1 maker_non_over exon 190886 191037 . + . ID=Zjn_sc00179.1.g00290.1.am.mk:exon:6
Zjn_sc00179.1 maker_non_over exon 191199 191236 . + . ID=Zjn_sc00179.1.g00290.1.am.mk:exon:7
Zjn_sc00179.1 maker_non_over exon 192351 192703 . + . ID=Zjn_sc00179.1.g00290.1.am.mk:exon:8

Top