Z. japonica Nagirizaki
Zjn_sc00179.1.g00060.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G37330.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 409 158 374 2e-93 66.7 41.3 48.9
Subject 273 18 234
Annot | Symbols: ALS3 | aluminum sensitive 3 | chr2:15669190-15670172 FORWARD LENGTH=273
NR ref|XP_006654935.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 409 137 377 e-119 69.2 53.1 56.5
Subject 283 6 248
Annot PREDICTED: UPF0014 membrane protein STAR2-like [Oryza brachyantha]
IRGSP Os05t0119000-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 409 137 377 e-109 69.7 51.6 54.5
Subject 285 7 249
Annot
Sbicolor Sobic.009G023700.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 409 137 374 e-119 68 53.8 56.7
Subject 278 3 240
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00179.1.g00060.1.am.mk length: 409 aa.
IPR005226 Conserved hypothetical protein CHP00245
method AccNumber shortName E-value location
HMMPfam PF03649 UPF0014 5.3e-50 169-374
HMMTigr TIGR00245 TIGR00245: 1.4e-49 170-374
no_ID  
HMMPanther PTHR30028 UPF0014 9.8e-95 144-374
HMMPanther PTHR30028:SF0 UPF0014 9.8e-95 144-374
Seg seg seg NA 2-18
115-124
133-144
167-177
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00179.1 maker_non_over exon 53794 53901 . - . ID=Zjn_sc00179.1.g00060.1.am.mk:exon:7
Zjn_sc00179.1 maker_non_over exon 61266 61460 . - . ID=Zjn_sc00179.1.g00060.1.am.mk:exon:6
Zjn_sc00179.1 maker_non_over exon 61751 61996 . - . ID=Zjn_sc00179.1.g00060.1.am.mk:exon:5
Zjn_sc00179.1 maker_non_over exon 62176 62454 . - . ID=Zjn_sc00179.1.g00060.1.am.mk:exon:4
Zjn_sc00179.1 maker_non_over exon 62488 62624 . - . ID=Zjn_sc00179.1.g00060.1.am.mk:exon:3
Zjn_sc00179.1 maker_non_over exon 62707 62840 . - . ID=Zjn_sc00179.1.g00060.1.am.mk:exon:2
Zjn_sc00179.1 maker_non_over exon 63816 63946 . - . ID=Zjn_sc00179.1.g00060.1.am.mk:exon:1

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