Z. japonica Nagirizaki
Zjn_sc00177.1.g00370.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G11880.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 409 43 394 9e-16 119.6 24.4 35.5
Subject 489 90 454
Annot | Symbols: | Pyridoxal-dependent decarboxylase family protein | chr5:3827806-3829942 REVERSE LENGTH=489
NR ref|XP_003578555.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 409 1 409 0.0 100 84.4 91
Subject 409 1 409
Annot PREDICTED: ornithine decarboxylase-like [Brachypodium distachyon]
IRGSP Os09t0543400-00_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 409 1 409 e-180 104.6 84.1 90.2
Subject 428 15 428
Annot
Sbicolor Sobic.002G282800.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 409 1 409 0.0 101 82.2 91
Subject 413 1 413
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00177.1.g00370.1.am.mk length: 409 aa.
IPR000183 Ornithine/DAP/Arg decarboxylase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
FPrintScan PR01179 ODADCRBXLASE 8.6e-32 78-96
98-110
201-214
281-300
383-396
IPR002433 Ornithine decarboxylase
Biological Process GO:0006596 polyamine biosynthetic process    
FPrintScan PR01182 ORNDCRBXLASE 1.6e-60 50-74
76-103
120-144
150-172
316-329
350-360
370-383
IPR009006 Alanine racemase/group IV decarboxylase, C-terminal
Molecular Function GO:0003824 catalytic activity    
Gene3D G3DSA:2.40.37.10 no description 1.4e-46 276-400
superfamily SSF50621 Alanine 1.7e-42 258-404
IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal
Molecular Function GO:0003824 catalytic activity    
HMMPfam PF00278 Orn_DAP_Arg_deC 2.3e-29 295-400
IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal
Molecular Function GO:0003824 catalytic activity    
HMMPfam PF02784 Orn_Arg_deC_N 3.5e-65 59-291
IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site
PatternScan PS00878 ODR_DC_2_1 NA 78-96
IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site
PatternScan PS00879 ODR_DC_2_2 NA 236-253
no_ID  
Gene3D G3DSA:3.20.20.10 no description 2.7e-74 62-275
HMMPanther PTHR11482 ARGININE/DIAMINOPIMELATE/ORNITHINE 1.5e-255 35-408
HMMPanther PTHR11482:SF29 SUBFAMILY 1.5e-255 35-408
Seg seg seg NA 89-98
224-237
249-263
superfamily SSF51419 PLP-binding 3.2e-65 56-293
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00177.1 maker_non_over exon 210549 211778 . + . ID=Zjn_sc00177.1.g00370.1.am.mk:exon:1

Top