Z. japonica Nagirizaki
Zjn_sc00166.1.g00440.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G62980.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 335 1 332 e-106 177.3 61.8 78.2
Subject 594 194 573
Annot | Symbols: TIR1 | F-box/RNI-like superfamily protein | chr3:23273479-23276181 REVERSE LENGTH=594
NR ref|XP_002440601.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 335 1 335 e-166 176.4 90.4 94
Subject 591 206 591
Annot hypothetical protein SORBIDRAFT_09g003870 [Sorghum bicolor] gi|241945886|gb|EES19031.1| hypothetical protein SORBIDRAFT_09g003870 [Sorghum bicolor]
IRGSP Os05t0150500-00_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 335 1 335 e-162 175.2 87.5 92.5
Subject 587 205 587
Annot
Sbicolor Sobic.009G045300.2.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 335 1 335 e-169 176.4 90.4 94
Subject 591 206 591
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00166.1.g00440.1.sm.mkhc length: 335 aa.
no_ID  
method AccNumber shortName E-value location
Gene3D G3DSA:3.80.10.10 no description 1.1e-12 8-161
177-289
HMMPanther PTHR23125 F-BOX/LEUCINE 4.2e-163 1-332
HMMPanther PTHR23125:SF17 GRR1-RELATED, 4.2e-163 1-332
superfamily SSF52047 RNI-like 1.2e-13 17-275
Pseudomolecule
Chromosome Start End Strand
17283396288053-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00166.1 maker exon 283396 284889 . - . ID=Zjn_sc00166.1.g00440.1.sm.mkhc:exon:4
Zjn_sc00166.1 maker exon 284960 284979 . - . ID=Zjn_sc00166.1.g00440.1.sm.mkhc:exon:3
Zjn_sc00166.1 maker exon 285490 285691 . - . ID=Zjn_sc00166.1.g00440.1.sm.mkhc:exon:2
Zjn_sc00166.1 maker exon 287916 288053 . - . ID=Zjn_sc00166.1.g00440.1.sm.mkhc:exon:1

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