Z. japonica Nagirizaki
Zjn_sc00164.1.g00190.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G80830.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 293 20 262 1e-70 181.6 47.1 64.8
Subject 532 195 496
Annot | Symbols: NRAMP1, PMIT1, ATNRAMP1 | natural resistance-associated macrophage protein 1 | chr1:30373066-30375644 REVERSE LENGTH=532
NR ref|XP_004959136.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 293 20 293 e-112 176.1 74.1 82.9
Subject 516 183 516
Annot PREDICTED: metal transporter Nramp1-like [Setaria italica]
IRGSP Os07t0258400-02_chr07_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 293 20 291 e-112 130.7 71.7 82.6
Subject 383 49 380
Annot
Sbicolor Sobic.002G095600.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 293 20 292 e-108 179.2 70.6 80.9
Subject 525 189 520
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00164.1.g00190.1.sm.mk length: 293 aa.
IPR001046 Natural resistance-associated macrophage like
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
HMMPanther PTHR11706 MANGANESE 5.7e-117 19-293
HMMPfam PF01566 Nramp 3.9e-30 19-67
67-223
no_ID  
HMMPanther PTHR11706:SF10 METAL 5.7e-117 19-293
Seg seg seg NA 173-189
Pseudomolecule
Chromosome Start End Strand
38100885205+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00164.1 maker_non_over exon 231860 232153 . - . ID=Zjn_sc00164.1.g00190.1.sm.mk:exon:6
Zjn_sc00164.1 maker_non_over exon 232481 232612 . - . ID=Zjn_sc00164.1.g00190.1.sm.mk:exon:5
Zjn_sc00164.1 maker_non_over exon 233100 233204 . - . ID=Zjn_sc00164.1.g00190.1.sm.mk:exon:4
Zjn_sc00164.1 maker_non_over exon 233294 233456 . - . ID=Zjn_sc00164.1.g00190.1.sm.mk:exon:3
Zjn_sc00164.1 maker_non_over exon 233850 233982 . - . ID=Zjn_sc00164.1.g00190.1.sm.mk:exon:2
Zjn_sc00164.1 maker_non_over exon 236003 236057 . - . ID=Zjn_sc00164.1.g00190.1.sm.mk:exon:1

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