Z. japonica Nagirizaki
Zjn_sc00164.1.g00160.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G31690.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 693 22 678 0.0 97.7 49.1 65.7
Subject 677 27 663
Annot | Symbols: | Copper amine oxidase family protein | chr1:11343980-11347767 FORWARD LENGTH=677
NR ref|XP_002452575.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 693 6 693 0.0 100.4 73.4 83.1
Subject 696 7 696
Annot hypothetical protein SORBIDRAFT_04g028410 [Sorghum bicolor] gi|241932406|gb|EES05551.1| hypothetical protein SORBIDRAFT_04g028410 [Sorghum bicolor]
IRGSP Os06t0338200-01_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 693 22 690 0.0 100.7 70 81.1
Subject 698 28 694
Annot
Sbicolor Sobic.004G243400.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 693 6 693 0.0 100.4 73.4 83.1
Subject 696 7 696
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00164.1.g00160.1.am.mk length: 693 aa.
IPR000269 Copper amine oxidase
method AccNumber shortName E-value location
Molecular Function GO:0005507 copper ion binding    
Molecular Function GO:0008131 primary amine oxidase activity    
Biological Process GO:0009308 amine metabolic process    
Molecular Function GO:0048038 quinone binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPanther PTHR10638 COPPER 5.5e-279 20-678
PatternScan PS01164 COPPER_AMINE_OXID_1 NA 408-421
IPR015798 Copper amine oxidase, C-terminal
Molecular Function GO:0005507 copper ion binding    
Molecular Function GO:0008131 primary amine oxidase activity    
Biological Process GO:0009308 amine metabolic process    
Molecular Function GO:0048038 quinone binding    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:2.70.98.20 no description 3.9e-151 217-684
HMMPfam PF01179 Cu_amine_oxid 5.7e-146 251-678
superfamily SSF49998 Amine 2.8e-147 238-687
IPR015800 Copper amine oxidase, N2-terminal
Molecular Function GO:0005507 copper ion binding    
Molecular Function GO:0008131 primary amine oxidase activity    
Biological Process GO:0009308 amine metabolic process    
Molecular Function GO:0048038 quinone binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF02727 Cu_amine_oxidN2 9.9e-19 22-105
IPR015801 Copper amine oxidase, N2/N3-terminal
Molecular Function GO:0005507 copper ion binding    
Biological Process GO:0009308 amine metabolic process    
Molecular Function GO:0048038 quinone binding    
Gene3D G3DSA:3.10.450.40 no description 5.9e-26 21-121
125-216
IPR015802 Copper amine oxidase, N3-terminal
Molecular Function GO:0005507 copper ion binding    
Molecular Function GO:0008131 primary amine oxidase activity    
Biological Process GO:0009308 amine metabolic process    
Molecular Function GO:0048038 quinone binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF02728 Cu_amine_oxidN3 1.3e-16 124-228
IPR016182 Copper amine oxidase, N-terminal
Molecular Function GO:0005507 copper ion binding    
Molecular Function GO:0008131 primary amine oxidase activity    
Biological Process GO:0009308 amine metabolic process    
Molecular Function GO:0048038 quinone binding    
Biological Process GO:0055114 oxidation-reduction process    
superfamily SSF54416 Amine 1.8e-19 121-242
19-121
no_ID  
HMMPanther PTHR10638:SF12 COPPER 5.5e-279 20-678
Seg seg seg NA 65-76
164-181
240-261
Pseudomolecule
Chromosome Start End Strand
394537100954+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00164.1 maker_non_over exon 216111 216884 . - . ID=Zjn_sc00164.1.g00160.1.am.mk:exon:4
Zjn_sc00164.1 maker_non_over exon 217002 217115 . - . ID=Zjn_sc00164.1.g00160.1.am.mk:exon:3
Zjn_sc00164.1 maker_non_over exon 217201 217585 . - . ID=Zjn_sc00164.1.g00160.1.am.mk:exon:2
Zjn_sc00164.1 maker_non_over exon 221720 222528 . - . ID=Zjn_sc00164.1.g00160.1.am.mk:exon:1

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