Zoysia Genome Database

Z. japonica Nagirizaki

Zjn_sc00155.1.g00700.1.sm.mk

Sequence

Transcript sequence

Predicted nucleotide sequence (cds)
Predicted translated sequence (pep)

Genome sequence (Zjn_sc00155.1)

BLAST

TAIR10	AT5G17310.2		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	404	2	404	0.0	116.3	83.4	89.9
		Subject	470	5	470
		Annot	\| Symbols: UGP2 \| UDP-glucose pyrophosphorylase 2 \| chr5:5696955-5700845 REVERSE LENGTH=470
NR	gb\|EMT17122.1\|		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	404	1	404	0.0	107.2	93.1	96
		Subject	433	1	433
		Annot	UTP--glucose-1-phosphate uridylyltransferase [Aegilops tauschii]
IRGSP	Os02t0117700-01_chr02_irgsp1_locus		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	404	1	404	0.0	115.6	92.6	97.3
		Subject	467	1	467
		Annot
Sbicolor	Sobic.004G013500.1.p\|Chr04\|gene		Length	Start	End	E-value	Length(%)	Iden(%)	Posi(%)
		Query	404	1	404	0.0	115.6	92.8	96.5
		Subject	467	1	467
		Annot

InterProScan

A list of protein families, domains and functional sites (searches in InterPro)

IPR002618	UTP--glucose-1-phosphate uridylyltransferase
Zjn_sc00155.1.g00700.1.sm.mk				length: 404 aa.
method	AccNumber	shortName	E-value	location
Biological Process	GO:0008152	metabolic process
Molecular Function	GO:0016779	nucleotidyltransferase activity
HMMPanther	PTHR11952	UDP-	3.6e-187	18-404
HMMPfam	PF01704	UDPGP	7.1e-37	23-209 209-304
IPR016267	UTP--glucose-1-phosphate uridylyltransferase, subgroup
HMMPanther	PTHR11952:SF1	UTP-GLUCOSE-1-PHOSPHATE	3.6e-187	18-404
no_ID
Gene3D	G3DSA:3.90.550.10	no description	1.4e-20	10-208 209-304
Seg	seg	seg	NA	72-83
superfamily	SSF53448	Nucleotide-diphospho-sugar	1.1e-66	8-402

Pseudomolecule

Chromosome	Start	End	Strand
8	310126	313806	-

Coding region

scaffold	source	type	start	end	score	strand	phase	attributes
Zjn_sc00155.1	maker_non_over	exon	310126	310152	.	-	.	ID=Zjn_sc00155.1.g00700.1.sm.mk:exon:18
Zjn_sc00155.1	maker_non_over	exon	310473	310544	.	-	.	ID=Zjn_sc00155.1.g00700.1.sm.mk:exon:17
Zjn_sc00155.1	maker_non_over	exon	310671	310775	.	-	.	ID=Zjn_sc00155.1.g00700.1.sm.mk:exon:16
Zjn_sc00155.1	maker_non_over	exon	310874	310972	.	-	.	ID=Zjn_sc00155.1.g00700.1.sm.mk:exon:15
Zjn_sc00155.1	maker_non_over	exon	311239	311295	.	-	.	ID=Zjn_sc00155.1.g00700.1.sm.mk:exon:14
Zjn_sc00155.1	maker_non_over	exon	311395	311470	.	-	.	ID=Zjn_sc00155.1.g00700.1.sm.mk:exon:13
Zjn_sc00155.1	maker_non_over	exon	311586	311638	.	-	.	ID=Zjn_sc00155.1.g00700.1.sm.mk:exon:12
Zjn_sc00155.1	maker_non_over	exon	311745	311777	.	-	.	ID=Zjn_sc00155.1.g00700.1.sm.mk:exon:11
Zjn_sc00155.1	maker_non_over	exon	311955	312020	.	-	.	ID=Zjn_sc00155.1.g00700.1.sm.mk:exon:10
Zjn_sc00155.1	maker_non_over	exon	312390	312462	.	-	.	ID=Zjn_sc00155.1.g00700.1.sm.mk:exon:9
Zjn_sc00155.1	maker_non_over	exon	312553	312626	.	-	.	ID=Zjn_sc00155.1.g00700.1.sm.mk:exon:8
Zjn_sc00155.1	maker_non_over	exon	312725	312775	.	-	.	ID=Zjn_sc00155.1.g00700.1.sm.mk:exon:7
Zjn_sc00155.1	maker_non_over	exon	312855	312932	.	-	.	ID=Zjn_sc00155.1.g00700.1.sm.mk:exon:6
Zjn_sc00155.1	maker_non_over	exon	313049	313109	.	-	.	ID=Zjn_sc00155.1.g00700.1.sm.mk:exon:5
Zjn_sc00155.1	maker_non_over	exon	313210	313300	.	-	.	ID=Zjn_sc00155.1.g00700.1.sm.mk:exon:4
Zjn_sc00155.1	maker_non_over	exon	313379	313470	.	-	.	ID=Zjn_sc00155.1.g00700.1.sm.mk:exon:3
Zjn_sc00155.1	maker_non_over	exon	313608	313655	.	-	.	ID=Zjn_sc00155.1.g00700.1.sm.mk:exon:2
Zjn_sc00155.1	maker_non_over	exon	313748	313806	.	-	.	ID=Zjn_sc00155.1.g00700.1.sm.mk:exon:1