Z. japonica Nagirizaki
Zjn_sc00154.1.g00130.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G32810.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 469 1 466 e-146 121.5 54.8 70.4
Subject 570 116 569
Annot | Symbols: CCD8, MAX4, ATCCD8 | carotenoid cleavage dioxygenase 8 | chr4:15828348-15831299 FORWARD LENGTH=570
NR ref|XP_004979135.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 469 1 468 0.0 115.6 72.9 81.9
Subject 542 91 542
Annot PREDICTED: carotenoid cleavage dioxygenase 8 homolog A, chloroplastic-like [Setaria italica]
IRGSP Os01t0566500-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 469 1 465 e-172 117.7 65.7 76.3
Subject 552 102 548
Annot
Sbicolor Sobic.005G105700.1.p|Chr05|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 469 1 468 0.0 112.6 71 79.5
Subject 528 83 528
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00154.1.g00130.1.am.mk length: 469 aa.
IPR004294 Carotenoid oxygenase
method AccNumber shortName E-value location
HMMPanther PTHR10543 BETA-CAROTENE 4.6e-179 1-467
HMMPfam PF03055 RPE65 1.8e-88 4-466
no_ID  
HMMPanther PTHR10543:SF6 BETA-CAROTENE 4.6e-179 1-467
Pseudomolecule
Chromosome Start End Strand
1342279774229668+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00154.1 maker_non_over exon 158215 158366 . - . ID=Zjn_sc00154.1.g00130.1.am.mk:exon:4
Zjn_sc00154.1 maker_non_over exon 158494 159067 . - . ID=Zjn_sc00154.1.g00130.1.am.mk:exon:3
Zjn_sc00154.1 maker_non_over exon 159179 159673 . - . ID=Zjn_sc00154.1.g00130.1.am.mk:exon:2
Zjn_sc00154.1 maker_non_over exon 159718 159906 . - . ID=Zjn_sc00154.1.g00130.1.am.mk:exon:1

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