Z. japonica Nagirizaki
Zjn_sc00153.1.g00350.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G58220.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 353 38 353 1e-91 91.8 49 62.9
Subject 324 15 324
Annot | Symbols: TTL | transthyretin-like protein | chr5:23554546-23555861 REVERSE LENGTH=324
NR ref|XP_004984152.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 353 22 353 e-165 94.1 81.3 86.4
Subject 332 1 332
Annot PREDICTED: uric acid degradation bifunctional protein TTL isoform X1 [Setaria italica]
IRGSP Os03t0390700-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 353 28 353 e-156 94.6 79.9 85.6
Subject 334 8 334
Annot
Sbicolor Sobic.001G350400.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 353 17 353 e-159 104.5 81.6 87.5
Subject 369 33 369
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00153.1.g00350.1.am.mkhc length: 353 aa.
IPR000895 Transthyretin/hydroxyisourate hydrolase
method AccNumber shortName E-value location
FPrintScan PR00189 TRNSTHYRETIN 8.9e-07 233-253
331-353
IPR014306 Hydroxyisourate hydrolase
Biological Process GO:0006144 purine nucleobase metabolic process    
Biological Process GO:0006810 transport    
Molecular Function GO:0033971 hydroxyisourate hydrolase activity    
HMMTigr TIGR02962 hdxy_isourate: 4e-27 233-353
IPR017129 Bifunctional hydroxyisourate hydrolase/2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase
HMMPIR PIRSF037178 Uncharacterised 7.7e-252 22-353
IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase
Gene3D G3DSA:1.10.3330.10 no description 2.6e-38 35-179
HMMPfam PF09349 OHCU_decarbox 6.4e-33 33-175
IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily
Gene3D G3DSA:2.60.40.180 no description 9.3e-33 230-353
HMMPfam PF00576 Transthyretin 8e-30 233-352
superfamily SSF49472 Transthyretin 2.4e-30 231-353
IPR023418 Transthyretin, thyroxine binding site
PatternScan PS00768 TRANSTHYRETIN_1 NA 237-252
no_ID  
HMMPanther PTHR10395 URICASE 2.5e-138 120-353
HMMPanther PTHR10395:SF7 TRANSTHYRETIN 2.5e-138 120-353
Seg seg seg NA 43-62
98-114
Pseudomolecule
Chromosome Start End Strand
298364719839560-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00153.1 maker exon 286345 286551 . + . ID=Zjn_sc00153.1.g00350.1.am.mkhc:exon:1
Zjn_sc00153.1 maker exon 286658 286731 . + . ID=Zjn_sc00153.1.g00350.1.am.mkhc:exon:2
Zjn_sc00153.1 maker exon 287099 287156 . + . ID=Zjn_sc00153.1.g00350.1.am.mkhc:exon:3
Zjn_sc00153.1 maker exon 287238 287339 . + . ID=Zjn_sc00153.1.g00350.1.am.mkhc:exon:4
Zjn_sc00153.1 maker exon 287933 288089 . + . ID=Zjn_sc00153.1.g00350.1.am.mkhc:exon:5
Zjn_sc00153.1 maker exon 288811 289434 . + . ID=Zjn_sc00153.1.g00350.1.am.mkhc:exon:6

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