Z. japonica Nagirizaki
Zjn_sc00153.1.g00310.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G22410.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 541 78 526 0.0 97.4 72.1 78
Subject 527 73 521
Annot | Symbols: | Class-II DAHP synthetase family protein | chr1:7912120-7914742 FORWARD LENGTH=527
NR ref|XP_004984156.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 541 24 539 0.0 101.7 87.6 91.7
Subject 550 27 548
Annot PREDICTED: phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic-like [Setaria italica]
IRGSP Os07t0622200-01_chr07_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 541 1 541 0.0 99.3 82.6 89.3
Subject 537 1 537
Annot
Sbicolor Sobic.002G379600.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 541 1 541 0.0 99.8 84.7 90.9
Subject 540 1 540
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00153.1.g00310.1.am.mkhc length: 541 aa.
IPR002480 DAHP synthetase, class II
method AccNumber shortName E-value location
Molecular Function GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity    
Biological Process GO:0009073 aromatic amino acid family biosynthetic process    
HMMPanther PTHR21337 PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE 2.5e-293 19-536
HMMPfam PF01474 DAHP_synth_2 4.7e-201 79-516
HMMTigr TIGR01358 DAHP_synth_II: 2.3e-228 80-523
no_ID  
HMMPanther PTHR21337:SF0 SUBFAMILY 2.5e-293 19-536
Seg seg seg NA 2-16
62-77
119-136
superfamily SSF51569 Aldolase 4.5e-199 57-521
Pseudomolecule
Chromosome Start End Strand
298523389856582-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00153.1 maker exon 269323 269917 . + . ID=Zjn_sc00153.1.g00310.1.am.mkhc:exon:1
Zjn_sc00153.1 maker exon 270027 270304 . + . ID=Zjn_sc00153.1.g00310.1.am.mkhc:exon:2
Zjn_sc00153.1 maker exon 271083 271359 . + . ID=Zjn_sc00153.1.g00310.1.am.mkhc:exon:3
Zjn_sc00153.1 maker exon 271449 271694 . + . ID=Zjn_sc00153.1.g00310.1.am.mkhc:exon:4
Zjn_sc00153.1 maker exon 272733 273567 . + . ID=Zjn_sc00153.1.g00310.1.am.mkhc:exon:5

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