Z. japonica Nagirizaki
Zjn_sc00152.1.g01010.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G13430.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 443 1 442 0.0 114.9 84 92.1
Subject 509 67 508
Annot | Symbols: IIL1, ATLEUC1 | isopropyl malate isomerase large subunit 1 | chr4:7804194-7807789 REVERSE LENGTH=509
NR ref|NP_001045743.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 443 1 443 0.0 116 95.3 97.3
Subject 514 72 514
Annot Os02g0125100 [Oryza sativa Japonica Group] gi|41053038|dbj|BAD07969.1| putative 3-isopropylmalate dehydratase large subunit [Oryza sativa Japonica Group] gi|113535274|dbj|BAF07657.1| Os02g0125100 [Oryza sativa Japonica Group] gi|215678837|dbj|BAG95274.1| unnamed protein product [Oryza sativa Japonica Group] gi|218189963|gb|EEC72390.1| hypothetical protein OsI_05669 [Oryza sativa Indica Group] gi|222622087|gb|EEE56219.1| hypothetical protein OsJ_05201 [Oryza sativa Japonica Group]
IRGSP Os02t0125100-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 443 1 443 0.0 116 95.3 97.3
Subject 514 72 514
Annot
Sbicolor Sobic.004G023900.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 443 1 443 0.0 114.4 95.3 97.3
Subject 507 65 507
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00152.1.g01010.1.sm.mkhc length: 443 aa.
IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
FPrintScan PR00415 ACONITASE 9.5e-16 124-137
138-153
200-213
214-227
371-384
HMMPfam PF00330 Aconitase 1.8e-18 3-292
296-433
superfamily SSF53732 Aconitase 3.1e-124 1-441
IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit
Biological Process GO:0008652 cellular amino acid biosynthetic process    
Molecular Function GO:0016836 hydro-lyase activity    
Molecular Function GO:0051539 4 iron, 4 sulfur cluster binding    
HMMPanther PTHR11670:SF6 3-ISOPROPYLMALATE 2.9e-248 1-441
HMMTigr TIGR01343 hacA_fam: 7.1e-127 2-439
IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.30.499.10 no description 4.5e-51 1-169
283-442
IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.1060.10 no description 5.6e-31 171-274
IPR015937 Aconitase/isopropylmalate dehydratase
Biological Process GO:0008152 metabolic process    
HMMPanther PTHR11670 ACONITASE 2.9e-248 1-441
Pseudomolecule
Chromosome Start End Strand
7425679430019-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00152.1 maker exon 425679 426439 . - . ID=Zjn_sc00152.1.g01010.1.sm.mkhc:exon:12
Zjn_sc00152.1 maker exon 426845 427003 . - . ID=Zjn_sc00152.1.g01010.1.sm.mkhc:exon:11
Zjn_sc00152.1 maker exon 427083 427130 . - . ID=Zjn_sc00152.1.g01010.1.sm.mkhc:exon:10
Zjn_sc00152.1 maker exon 427804 427935 . - . ID=Zjn_sc00152.1.g01010.1.sm.mkhc:exon:9
Zjn_sc00152.1 maker exon 428024 428078 . - . ID=Zjn_sc00152.1.g01010.1.sm.mkhc:exon:8
Zjn_sc00152.1 maker exon 428336 428385 . - . ID=Zjn_sc00152.1.g01010.1.sm.mkhc:exon:7
Zjn_sc00152.1 maker exon 428854 428949 . - . ID=Zjn_sc00152.1.g01010.1.sm.mkhc:exon:6
Zjn_sc00152.1 maker exon 429033 429110 . - . ID=Zjn_sc00152.1.g01010.1.sm.mkhc:exon:5
Zjn_sc00152.1 maker exon 429191 429265 . - . ID=Zjn_sc00152.1.g01010.1.sm.mkhc:exon:4
Zjn_sc00152.1 maker exon 429358 429474 . - . ID=Zjn_sc00152.1.g01010.1.sm.mkhc:exon:3
Zjn_sc00152.1 maker exon 429558 429626 . - . ID=Zjn_sc00152.1.g01010.1.sm.mkhc:exon:2
Zjn_sc00152.1 maker exon 429708 430019 . - . ID=Zjn_sc00152.1.g01010.1.sm.mkhc:exon:1

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