Z. japonica Nagirizaki
Zjn_sc00152.1.g00640.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G35790.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 876 4 875 0.0 97.8 52.5 66.6
Subject 857 6 856
Annot | Symbols: ATPLDDELTA, PLDDELTA | phospholipase D delta | chr4:16955774-16959875 REVERSE LENGTH=857
NR ref|XP_012701847.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 876 27 876 0.0 98.9 70 77.7
Subject 866 1 866
Annot PREDICTED: phospholipase D delta-like [Setaria italica]
IRGSP Os09t0543100-02_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 876 9 876 0.0 97.5 55.5 68.3
Subject 854 20 854
Annot
Sbicolor Sobic.004G016900.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 876 10 876 0.0 101.9 67.9 75.5
Subject 893 14 893
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00152.1.g00640.1.am.mk length: 876 aa.
IPR000008 C2 calcium-dependent membrane targeting
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00168 C2 1e-14 14-153
HMMSmart SM00239 Protein 7.3e-09 13-184
IPR001736 Phospholipase D/Transphosphatidylase
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF00614 PLDc 9.6e-07 740-764
HMMSmart SM00155 Phospholipase 9.4e-08 381-416
737-764
ProfileScan PS50035 PLD 14.470 381-416
737-764
IPR008973 C2 calcium/lipid-binding domain, CaLB
Molecular Function GO:0005515 protein binding    
superfamily SSF49562 C2 4.6e-18 7-201
IPR011402 Phospholipase D, plant
Molecular Function GO:0004630 phospholipase D activity    
Molecular Function GO:0005509 calcium ion binding    
Cellular Component GO:0016020 membrane    
Biological Process GO:0046470 phosphatidylcholine metabolic process    
HMMPIR PIRSF036470 Phospholipase 0 1-876
IPR015679 Phospholipase D family
HMMPanther PTHR18896 PHOSPHOLIPASE 0 9-876
IPR018029 C2 membrane targeting protein
ProfileScan PS50004 C2 8.680 89-154
IPR024632 Phospholipase D, C-terminal
HMMPfam PF12357 PLD_C 5.5e-13 811-867
no_ID  
Gene3D G3DSA:2.60.40.150 no description 6.6e-15 88-198
Gene3D G3DSA:3.30.870.10 no description 6e-12 452-489
729-784
HMMPanther PTHR18896:SF13 PHOSPHOLIPASE 0 9-876
Seg seg seg NA 62-77
superfamily SSF56024 Phospholipase 5.1e-26 577-819
215-486
Pseudomolecule
Chromosome Start End Strand
7293935296882+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00152.1 maker_non_over exon 293935 295046 . + . ID=Zjn_sc00152.1.g00640.1.am.mk:exon:1
Zjn_sc00152.1 maker_non_over exon 295156 295666 . + . ID=Zjn_sc00152.1.g00640.1.am.mk:exon:2
Zjn_sc00152.1 maker_non_over exon 295753 295818 . + . ID=Zjn_sc00152.1.g00640.1.am.mk:exon:3
Zjn_sc00152.1 maker_non_over exon 295902 296771 . + . ID=Zjn_sc00152.1.g00640.1.am.mk:exon:4
Zjn_sc00152.1 maker_non_over exon 296811 296882 . + . ID=Zjn_sc00152.1.g00640.1.am.mk:exon:5

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