Z. japonica Nagirizaki
Zjn_sc00151.1.g00180.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G24830.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 553 109 551 0.0 89.3 62.6 70.7
Subject 494 41 492
Annot | Symbols: | arginosuccinate synthase family | chr4:12793085-12795857 REVERSE LENGTH=494
NR ref|XP_002442053.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 553 91 553 0.0 87.5 76.5 79.2
Subject 484 7 484
Annot hypothetical protein SORBIDRAFT_08g008320 [Sorghum bicolor] gi|241942746|gb|EES15891.1| hypothetical protein SORBIDRAFT_08g008320 [Sorghum bicolor]
IRGSP Os12t0235800-01_chr12_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 553 92 553 0.0 87 71.8 75.9
Subject 481 13 481
Annot
Sbicolor Sobic.008G083400.1.p|Chr08|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 553 91 553 0.0 87.5 76.5 79.2
Subject 484 7 484
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00151.1.g00180.1.sm.mkhc length: 553 aa.
IPR001518 Argininosuccinate synthase
method AccNumber shortName E-value location
Molecular Function GO:0004055 argininosuccinate synthase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006526 arginine biosynthetic process    
HMMPanther PTHR11587 ARGININOSUCCINATE 6.4e-225 150-551
HMMPfam PF00764 Arginosuc_synth 1.3e-158 159-545
HMMTigr TIGR00032 argG: 9.8e-152 157-547
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
Gene3D G3DSA:3.40.50.620 no description 1.8e-66 157-326
IPR018223 Argininosuccinate synthase, conserved site
Molecular Function GO:0004055 argininosuccinate synthase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006526 arginine biosynthetic process    
PatternScan PS00564 ARGININOSUCCIN_SYN_1 NA 161-169
PatternScan PS00565 ARGININOSUCCIN_SYN_2 NA 270-281
IPR023434 Argininosuccinate synthase, type 1 subfamily
Molecular Function GO:0004055 argininosuccinate synthase activity    
HAMAP MF_00005 Arg_succ_synth_type1 54.025 155-551
IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body
Molecular Function GO:0004055 argininosuccinate synthase activity    
Gene3D G3DSA:3.90.1260.10 no description 5.9e-91 328-551
no_ID  
Seg seg seg NA 38-81
superfamily SSF52402 Adenine 1.6e-53 156-326
superfamily SSF69864 Argininosuccinate 1.2e-91 327-551
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00151.1 maker exon 115758 116787 . - . ID=Zjn_sc00151.1.g00180.1.sm.mkhc:exon:11
Zjn_sc00151.1 maker exon 116904 116992 . - . ID=Zjn_sc00151.1.g00180.1.sm.mkhc:exon:10
Zjn_sc00151.1 maker exon 117122 117307 . - . ID=Zjn_sc00151.1.g00180.1.sm.mkhc:exon:9
Zjn_sc00151.1 maker exon 117375 117449 . - . ID=Zjn_sc00151.1.g00180.1.sm.mkhc:exon:8
Zjn_sc00151.1 maker exon 117659 117841 . - . ID=Zjn_sc00151.1.g00180.1.sm.mkhc:exon:7
Zjn_sc00151.1 maker exon 118151 118199 . - . ID=Zjn_sc00151.1.g00180.1.sm.mkhc:exon:6
Zjn_sc00151.1 maker exon 118304 118445 . - . ID=Zjn_sc00151.1.g00180.1.sm.mkhc:exon:5
Zjn_sc00151.1 maker exon 118454 118460 . - . ID=Zjn_sc00151.1.g00180.1.sm.mkhc:exon:4
Zjn_sc00151.1 maker exon 118926 118970 . - . ID=Zjn_sc00151.1.g00180.1.sm.mkhc:exon:3
Zjn_sc00151.1 maker exon 119072 119124 . - . ID=Zjn_sc00151.1.g00180.1.sm.mkhc:exon:2
Zjn_sc00151.1 maker exon 119247 119526 . - . ID=Zjn_sc00151.1.g00180.1.sm.mkhc:exon:1

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