Z. japonica Nagirizaki
Zjn_sc00150.1.g00670.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT1G77250.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
262 |
163 |
262 |
3e-11 |
199.2 |
14.1 |
23.3 |
| Subject |
522 |
120 |
219 |
|
| Annot |
| Symbols: | RING/FYVE/PHD-type zinc finger family protein | chr1:29020444-29022938 REVERSE LENGTH=522 |
| NR |
ref|XP_012702115.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
262 |
1 |
261 |
3e-74 |
219.1 |
59.9 |
72.5 |
| Subject |
574 |
1 |
270 |
|
| Annot |
PREDICTED: uncharacterized protein LOC101754375 isoform X1 [Setaria italica] |
| IRGSP |
Os08t0105000-02_chr08_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
262 |
31 |
261 |
1e-47 |
214.9 |
43.5 |
56.1 |
| Subject |
563 |
22 |
241 |
|
| Annot |
|
| Sbicolor |
Sobic.007G004200.1.p|Chr07|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
262 |
1 |
261 |
2e-68 |
210.3 |
55 |
66.4 |
| Subject |
551 |
1 |
253 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00150.1.g00670.1.sm.mkhc |
length: 262 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Seg |
seg |
seg |
NA |
8-23 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 13 | 96687 | 99998 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00150.1 |
maker |
exon |
331019 |
331030 |
. |
- |
. |
ID=Zjn_sc00150.1.g00670.1.sm.mkhc:exon:5 |
| Zjn_sc00150.1 |
maker |
exon |
331591 |
331680 |
. |
- |
. |
ID=Zjn_sc00150.1.g00670.1.sm.mkhc:exon:4 |
| Zjn_sc00150.1 |
maker |
exon |
333325 |
333654 |
. |
- |
. |
ID=Zjn_sc00150.1.g00670.1.sm.mkhc:exon:3 |
| Zjn_sc00150.1 |
maker |
exon |
333743 |
333943 |
. |
- |
. |
ID=Zjn_sc00150.1.g00670.1.sm.mkhc:exon:2 |
| Zjn_sc00150.1 |
maker |
exon |
334175 |
334330 |
. |
- |
. |
ID=Zjn_sc00150.1.g00670.1.sm.mkhc:exon:1 |