Z. japonica Nagirizaki
Zjn_sc00149.1.g00390.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G27680.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 465 71 367 e-122 111.4 45.6 54.6
Subject 518 78 441
Annot | Symbols: APL2 | ADPGLC-PPase large subunit | chr1:9631630-9634450 FORWARD LENGTH=518
NR ref|NP_001106058.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 465 1 380 e-159 110.5 66 69.9
Subject 514 1 450
Annot putative glucose-1-phosphate adenylyltransferase large subunit 3 precursor [Zea mays] gi|152004123|gb|ABS19874.1| putative glucose-1-phosphate adenylyltransferase large subunit 3 precursor [Zea mays]
IRGSP Os07t0243200-01_chr07_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 465 51 367 e-154 109.5 60.2 62.8
Subject 509 46 432
Annot
Sbicolor Sobic.002G088600.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 465 48 367 e-154 110.3 61.9 63.2
Subject 513 48 436
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00149.1.g00390.1.sm.mk length: 465 aa.
IPR005835 Nucleotidyl transferase
method AccNumber shortName E-value location
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0016779 nucleotidyltransferase activity    
HMMPfam PF00483 NTP_transferase 6.6e-08 80-193
237-284
IPR005836 ADP-glucose pyrophosphorylase, conserved site
Biological Process GO:0005978 glycogen biosynthetic process    
Molecular Function GO:0008878 glucose-1-phosphate adenylyltransferase activity    
PatternScan PS00808 ADP_GLC_PYROPHOSPH_1 NA 84-103
PatternScan PS00809 ADP_GLC_PYROPHOSPH_2 NA 175-183
IPR011004 Trimeric LpxA-like
superfamily SSF51161 Trimeric 1.6e-06 300-365
no_ID  
Gene3D G3DSA:3.90.550.10 no description 2e-42 81-350
HMMPanther PTHR22572 SUGAR-1-PHOSPHATE 1.6e-139 46-350
HMMPanther PTHR22572:SF10 GLUCOSE-1-PHOSPHATE 1.6e-139 46-350
Seg seg seg NA 2-18
35-46
389-427
superfamily SSF53448 Nucleotide-diphospho-sugar 2.3e-56 78-331
Pseudomolecule
Chromosome Start End Strand
3374997391722-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00149.1 maker_non_over exon 368223 368393 . + . ID=Zjn_sc00149.1.g00390.1.sm.mk:exon:1
Zjn_sc00149.1 maker_non_over exon 368558 368692 . + . ID=Zjn_sc00149.1.g00390.1.sm.mk:exon:2
Zjn_sc00149.1 maker_non_over exon 368884 369057 . + . ID=Zjn_sc00149.1.g00390.1.sm.mk:exon:3
Zjn_sc00149.1 maker_non_over exon 369169 369261 . + . ID=Zjn_sc00149.1.g00390.1.sm.mk:exon:4
Zjn_sc00149.1 maker_non_over exon 369523 369578 . + . ID=Zjn_sc00149.1.g00390.1.sm.mk:exon:5
Zjn_sc00149.1 maker_non_over exon 369847 369920 . + . ID=Zjn_sc00149.1.g00390.1.sm.mk:exon:6
Zjn_sc00149.1 maker_non_over exon 370494 370564 . + . ID=Zjn_sc00149.1.g00390.1.sm.mk:exon:7
Zjn_sc00149.1 maker_non_over exon 370682 370762 . + . ID=Zjn_sc00149.1.g00390.1.sm.mk:exon:8
Zjn_sc00149.1 maker_non_over exon 370847 370933 . + . ID=Zjn_sc00149.1.g00390.1.sm.mk:exon:9
Zjn_sc00149.1 maker_non_over exon 371007 371111 . + . ID=Zjn_sc00149.1.g00390.1.sm.mk:exon:10
Zjn_sc00149.1 maker_non_over exon 372703 372748 . + . ID=Zjn_sc00149.1.g00390.1.sm.mk:exon:11
Zjn_sc00149.1 maker_non_over exon 374066 374117 . + . ID=Zjn_sc00149.1.g00390.1.sm.mk:exon:12
Zjn_sc00149.1 maker_non_over exon 384696 384948 . + . ID=Zjn_sc00149.1.g00390.1.sm.mk:exon:13

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