Z. japonica Nagirizaki
Zjn_sc00146.1.g00160.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G76430.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 646 107 635 e-164 82.4 45.2 57.9
Subject 532 1 528
Annot | Symbols: PHT1;9 | phosphate transporter 1;9 | chr1:28679115-28681874 REVERSE LENGTH=532
NR ref|XP_002436966.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 646 107 641 0.0 88.7 67.5 72.6
Subject 573 1 552
Annot hypothetical protein SORBIDRAFT_10g012710 [Sorghum bicolor] gi|241915189|gb|EER88333.1| hypothetical protein SORBIDRAFT_10g012710 [Sorghum bicolor]
IRGSP Os06t0325200-00_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 646 107 645 0.0 85.4 66.9 72.9
Subject 552 1 538
Annot
Sbicolor Sobic.010G133300.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 646 107 641 0.0 88.7 67.5 72.6
Subject 573 1 552
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00146.1.g00160.1.am.mk length: 646 aa.
IPR005828 General substrate transporter
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0022857 transmembrane transporter activity    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00083 Sugar_tr 5.9e-48 130-617
IPR005829 Sugar transporter, conserved site
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
PatternScan PS00216 SUGAR_TRANSPORT_1 NA 464-480
PatternScan PS00217 SUGAR_TRANSPORT_2 NA 240-265
IPR016196 Major facilitator superfamily domain, general substrate transporter
superfamily SSF103473 MFS 1.3e-61 107-618
IPR020846 Major facilitator superfamily domain
ProfileScan PS50850 MFS 35.134 128-610
no_ID  
Gene3D G3DSA:1.20.1250.20 no description 1.1e-13 127-342
455-618
HMMPanther PTHR24064 FAMILY 1.7e-178 85-646
HMMPanther PTHR24064:SF0 SUBFAMILY 1.7e-178 85-646
Seg seg seg NA 172-196
213-224
282-293
370-375
478-493
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00146.1 maker_non_over exon 165940 166861 . - . ID=Zjn_sc00146.1.g00160.1.am.mk:exon:5
Zjn_sc00146.1 maker_non_over exon 167941 168686 . - . ID=Zjn_sc00146.1.g00160.1.am.mk:exon:4
Zjn_sc00146.1 maker_non_over exon 168739 168920 . - . ID=Zjn_sc00146.1.g00160.1.am.mk:exon:3
Zjn_sc00146.1 maker_non_over exon 168965 169043 . - . ID=Zjn_sc00146.1.g00160.1.am.mk:exon:2
Zjn_sc00146.1 maker_non_over exon 170161 170172 . - . ID=Zjn_sc00146.1.g00160.1.am.mk:exon:1

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