Z. japonica Nagirizaki
Zjn_sc00144.1.g00660.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G77690.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 477 1 476 0.0 98.5 83.6 89.7
Subject 470 1 468
Annot | Symbols: LAX3 | like AUX1 3 | chr1:29201232-29203317 REVERSE LENGTH=470
NR ref|XP_004978788.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 477 1 476 0.0 101 91 94.3
Subject 482 1 481
Annot PREDICTED: putative auxin transporter-like protein 4 [Setaria italica]
IRGSP Os11t0169200-00_chr11_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 477 1 476 0.0 100.6 86 93.9
Subject 480 1 479
Annot
Sbicolor Sobic.005G052500.1.p|Chr05|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 477 1 476 0.0 102.1 90.8 94.3
Subject 487 1 486
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00144.1.g00660.1.am.mk length: 477 aa.
IPR013057 Amino acid transporter, transmembrane
method AccNumber shortName E-value location
HMMPfam PF01490 Aa_trans 7.5e-73 50-417
no_ID  
HMMPanther PTHR22950 AMINO 0 1-471
HMMPanther PTHR22950:SF3 AUX1-LIKE 0 1-471
Seg seg seg NA 21-47
273-287
436-452
Pseudomolecule
Chromosome Start End Strand
9761235763074-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00144.1 maker_non_over exon 437718 438211 . + . ID=Zjn_sc00144.1.g00660.1.am.mk:exon:1
Zjn_sc00144.1 maker_non_over exon 438346 438529 . + . ID=Zjn_sc00144.1.g00660.1.am.mk:exon:2
Zjn_sc00144.1 maker_non_over exon 438641 438738 . + . ID=Zjn_sc00144.1.g00660.1.am.mk:exon:3
Zjn_sc00144.1 maker_non_over exon 438900 439557 . + . ID=Zjn_sc00144.1.g00660.1.am.mk:exon:4

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