Z. japonica Nagirizaki
Zjn_sc00142.1.g00750.1.sm.mk
Sequence
-
BLAST
| TAIR10 |
No_hits |
| NR |
ref|XP_002445198.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
225 |
16 |
217 |
3e-36 |
283.6 |
43.6 |
57.3 |
| Subject |
638 |
22 |
246 |
|
| Annot |
hypothetical protein SORBIDRAFT_07g005770 [Sorghum bicolor] gi|241941548|gb|EES14693.1| hypothetical protein SORBIDRAFT_07g005770 [Sorghum bicolor] |
| IRGSP |
Os08t0197100-01_chr08_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
225 |
16 |
153 |
2e-27 |
217.8 |
29.3 |
36.9 |
| Subject |
490 |
18 |
153 |
|
| Annot |
|
| Sbicolor |
Sobic.007G072800.1.p|Chr07|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
225 |
16 |
217 |
3e-39 |
278.7 |
44.4 |
59.1 |
| Subject |
627 |
22 |
246 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00142.1.g00750.1.sm.mk |
length: 225 aa. |
| IPR001810 |
F-box domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| superfamily |
SSF81383 |
F-box |
4.3e-07 |
11-83 |
| no_ID |
|
| Gene3D |
G3DSA:3.80.10.10 |
no description |
4.8e-08 |
152-203 |
| Seg |
seg |
seg |
NA |
2-15 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 13 | 2225259 | 2227478 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00142.1 |
maker_non_over |
exon |
504109 |
504168 |
. |
- |
. |
ID=Zjn_sc00142.1.g00750.1.sm.mk:exon:4 |
| Zjn_sc00142.1 |
maker_non_over |
exon |
504262 |
504417 |
. |
- |
. |
ID=Zjn_sc00142.1.g00750.1.sm.mk:exon:3 |
| Zjn_sc00142.1 |
maker_non_over |
exon |
505843 |
506100 |
. |
- |
. |
ID=Zjn_sc00142.1.g00750.1.sm.mk:exon:2 |
| Zjn_sc00142.1 |
maker_non_over |
exon |
506125 |
506328 |
. |
- |
. |
ID=Zjn_sc00142.1.g00750.1.sm.mk:exon:1 |