Z. japonica Nagirizaki
Zjn_sc00142.1.g00640.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G12750.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 386 17 386 e-100 92 50.3 64.8
Subject 355 13 355
Annot | Symbols: ZIP1 | zinc transporter 1 precursor | chr3:4051950-4053156 REVERSE LENGTH=355
NR ref|XP_003581657.2| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 386 36 386 e-139 93.3 68.9 77.5
Subject 360 21 360
Annot PREDICTED: zinc transporter 3-like isoform X1 [Brachypodium distachyon]
IRGSP Os04t0613000-01_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 386 39 386 e-134 94.3 67.4 73.8
Subject 364 24 364
Annot
Sbicolor Sobic.006G212200.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 386 12 386 e-133 95.1 69.2 78.2
Subject 367 3 367
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00142.1.g00640.1.sm.mk length: 386 aa.
IPR003689 Zinc/iron permease
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
Biological Process GO:0030001 metal ion transport    
Molecular Function GO:0046873 metal ion transmembrane transporter activity    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF02535 Zip 2.1e-63 60-383
IPR004698 Zinc/iron permease, fungal/plant
Molecular Function GO:0005385 zinc ion transmembrane transporter activity    
Cellular Component GO:0016021 integral to membrane    
Biological Process GO:0071577 zinc ion transmembrane transport    
HMMTigr TIGR00820 zip: 7e-120 49-386
no_ID  
HMMPanther PTHR11040 ZINC/IRON 2e-147 42-386
HMMPanther PTHR11040:SF1 ZINC/IRON 2e-147 42-386
Seg seg seg NA 11-58
95-106
137-151
183-218
Pseudomolecule
Chromosome Start End Strand
1322899642292293+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00142.1 maker_non_over exon 439294 439599 . - . ID=Zjn_sc00142.1.g00640.1.sm.mk:exon:3
Zjn_sc00142.1 maker_non_over exon 440201 440350 . - . ID=Zjn_sc00142.1.g00640.1.sm.mk:exon:2
Zjn_sc00142.1 maker_non_over exon 440919 441623 . - . ID=Zjn_sc00142.1.g00640.1.sm.mk:exon:1

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