Z. japonica Nagirizaki
Zjn_sc00141.1.g01010.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G24580.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 514 56 320 3e-57 181.5 28.2 37.4
Subject 933 104 440
Annot | Symbols: REN1 | Rho GTPase activation protein (RhoGAP) with PH domain | chr4:12687879-12694248 REVERSE LENGTH=933
NR gb|EEC74893.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 514 1 481 e-151 143 70.2 78.4
Subject 735 1 641
Annot hypothetical protein OsI_10808 [Oryza sativa Indica Group]
IRGSP Os03t0256800-00_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 514 1 370 e-128 96.5 55.8 61.7
Subject 496 1 469
Annot
Sbicolor Sobic.010G003200.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 514 1 380 e-128 163.8 58 62.8
Subject 842 1 473
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00141.1.g01010.1.sm.mk length: 514 aa.
IPR001849 Pleckstrin homology domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0005543 phospholipid binding    
ProfileScan PS50003 PH_DOMAIN 7.241 1-119
IPR008936 Rho GTPase activation protein
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007165 signal transduction    
superfamily SSF48350 GTPase 4.6e-06 163-269
IPR011993 Pleckstrin homology-like domain
Gene3D G3DSA:2.30.29.30 no description 1.5e-05 64-126
IPR025757 Ternary complex factor MIP1, leucine-zipper
HMMPfam PF14389 Lzipper-MIP1 5.9e-18 390-482
no_ID  
Coil coil coiled-coil NA 384-426
457-478
Seg seg seg NA 256-271
289-302
387-404
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00141.1 maker_non_over exon 436973 436996 . - . ID=Zjn_sc00141.1.g01010.1.sm.mk:exon:16
Zjn_sc00141.1 maker_non_over exon 437107 437164 . - . ID=Zjn_sc00141.1.g01010.1.sm.mk:exon:15
Zjn_sc00141.1 maker_non_over exon 437319 437452 . - . ID=Zjn_sc00141.1.g01010.1.sm.mk:exon:14
Zjn_sc00141.1 maker_non_over exon 437504 437620 . - . ID=Zjn_sc00141.1.g01010.1.sm.mk:exon:13
Zjn_sc00141.1 maker_non_over exon 437889 437972 . - . ID=Zjn_sc00141.1.g01010.1.sm.mk:exon:12
Zjn_sc00141.1 maker_non_over exon 439279 439497 . - . ID=Zjn_sc00141.1.g01010.1.sm.mk:exon:11
Zjn_sc00141.1 maker_non_over exon 439617 439802 . - . ID=Zjn_sc00141.1.g01010.1.sm.mk:exon:10
Zjn_sc00141.1 maker_non_over exon 440366 440435 . - . ID=Zjn_sc00141.1.g01010.1.sm.mk:exon:9
Zjn_sc00141.1 maker_non_over exon 440524 440579 . - . ID=Zjn_sc00141.1.g01010.1.sm.mk:exon:8
Zjn_sc00141.1 maker_non_over exon 440840 440886 . - . ID=Zjn_sc00141.1.g01010.1.sm.mk:exon:7
Zjn_sc00141.1 maker_non_over exon 440983 441087 . - . ID=Zjn_sc00141.1.g01010.1.sm.mk:exon:6
Zjn_sc00141.1 maker_non_over exon 441418 441562 . - . ID=Zjn_sc00141.1.g01010.1.sm.mk:exon:5
Zjn_sc00141.1 maker_non_over exon 441660 441738 . - . ID=Zjn_sc00141.1.g01010.1.sm.mk:exon:4
Zjn_sc00141.1 maker_non_over exon 441824 441894 . - . ID=Zjn_sc00141.1.g01010.1.sm.mk:exon:3
Zjn_sc00141.1 maker_non_over exon 442779 442892 . - . ID=Zjn_sc00141.1.g01010.1.sm.mk:exon:2
Zjn_sc00141.1 maker_non_over exon 443322 443357 . - . ID=Zjn_sc00141.1.g01010.1.sm.mk:exon:1

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