Z. japonica Nagirizaki
Zjn_sc00141.1.g00060.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G34710.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 699 1 655 0.0 101.7 62.9 75.8
Subject 711 1 678
Annot | Symbols: ADC2, SPE2, ATADC2 | arginine decarboxylase 2 | chr4:16560315-16562450 REVERSE LENGTH=711
NR ref|XP_004964433.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 699 1 662 0.0 100.7 86.1 89.3
Subject 704 1 666
Annot PREDICTED: arginine decarboxylase 1 [Setaria italica]
IRGSP Os06t0131300-00_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 699 1 699 0.0 100.4 91.1 93.8
Subject 702 1 702
Annot
Sbicolor Sobic.010G021800.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 699 1 699 0.0 100.3 87.8 91.1
Subject 701 1 701
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00141.1.g00060.1.sm.mk length: 699 aa.
IPR000183 Ornithine/DAP/Arg decarboxylase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
FPrintScan PR01179 ODADCRBXLASE 1.8e-22 145-163
169-181
289-302
384-403
574-587
IPR002985 Arginine decarboxylase
Biological Process GO:0006527 arginine catabolic process    
Biological Process GO:0008295 spermidine biosynthetic process    
Molecular Function GO:0008792 arginine decarboxylase activity    
FPrintScan PR01180 ARGDCRBXLASE 1.2e-97 113-128
137-151
196-211
222-243
246-268
374-391
497-518
522-547
574-595
HMMPIR PIRSF001336 Arginine 0 43-667
HMMPanther PTHR11482:SF3 ARGININE 0 1-636
HMMTigr TIGR01273 speA: 5.2e-217 43-640
IPR009006 Alanine racemase/group IV decarboxylase, C-terminal
Molecular Function GO:0003824 catalytic activity    
Gene3D G3DSA:2.40.37.10 no description 3.6e-10 487-598
IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal
Molecular Function GO:0003824 catalytic activity    
HMMPfam PF00278 Orn_DAP_Arg_deC 3.9e-28 491-595
IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal
Molecular Function GO:0003824 catalytic activity    
HMMPfam PF02784 Orn_Arg_deC_N 1.3e-57 125-395
IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site
PatternScan PS00878 ODR_DC_2_1 NA 145-163
no_ID  
Gene3D G3DSA:3.20.20.10 no description 4.2e-50 115-374
HMMPanther PTHR11482 ARGININE/DIAMINOPIMELATE/ORNITHINE 0 1-636
Seg seg seg NA 3-17
21-35
40-51
90-121
363-370
636-651
673-690
superfamily SSF51419 PLP-binding 1.3e-69 113-397
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00141.1 maker_non_over exon 18675 20774 . + . ID=Zjn_sc00141.1.g00060.1.sm.mk:exon:1

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