Z. japonica Nagirizaki
Zjn_sc00136.1.g00120.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G43410.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 142 3 114 4e-26 92.3 46.5 52.8
Subject 131 7 114
Annot | Symbols: | Integrase-type DNA-binding superfamily protein | chr5:17435010-17435405 REVERSE LENGTH=131
NR gb|EMT06920.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 142 14 128 7e-35 128.9 56.3 59.2
Subject 183 80 183
Annot Ethylene-responsive transcription factor ERF098 [Aegilops tauschii]
IRGSP Os09t0571700-00_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 142 15 119 5e-29 92.3 45.1 52.1
Subject 131 15 124
Annot
Sbicolor Sobic.002G139300.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 142 14 119 5e-29 90.8 50.7 56.3
Subject 129 7 114
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00136.1.g00120.1.sm.mk length: 142 aa.
IPR001471 AP2/ERF domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 9.2e-10 18-29
41-57
Gene3D G3DSA:3.30.730.10 no description 4.9e-29 17-75
HMMPfam PF00847 AP2 7.2e-17 16-67
HMMSmart SM00380 DNA-binding 1.6e-31 17-81
ProfileScan PS51032 AP2_ERF 22.405 17-75
IPR016177 DNA-binding domain
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 7.9e-24 16-78
no_ID  
HMMPanther PTHR31985 FAMILY 7.2e-19 18-95
Seg seg seg NA 51-63
84-101
110-132
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00136.1 maker_non_over exon 218209 218246 . - . ID=Zjn_sc00136.1.g00120.1.sm.mk:exon:3
Zjn_sc00136.1 maker_non_over exon 220546 220555 . - . ID=Zjn_sc00136.1.g00120.1.sm.mk:exon:2
Zjn_sc00136.1 maker_non_over exon 221455 221835 . - . ID=Zjn_sc00136.1.g00120.1.sm.mk:exon:1

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