Z. japonica Nagirizaki
Zjn_sc00133.1.g00720.1.sm.mk
Sequence
-
BLAST
| TAIR10 |
AT1G27680.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
256 |
114 |
253 |
2e-43 |
202.3 |
35.9 |
44.1 |
| Subject |
518 |
314 |
515 |
|
| Annot |
| Symbols: APL2 | ADPGLC-PPase large subunit | chr1:9631630-9634450 FORWARD LENGTH=518 |
| NR |
gb|EMS53815.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
256 |
9 |
254 |
1e-99 |
178.9 |
75.4 |
84.8 |
| Subject |
458 |
64 |
400 |
|
| Annot |
Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic [Triticum urartu] |
| IRGSP |
Os01t0633100-01_chr01_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
256 |
114 |
256 |
1e-57 |
202.3 |
45.7 |
50 |
| Subject |
518 |
314 |
518 |
|
| Annot |
|
| Sbicolor |
Sobic.009G245000.1.p|Chr09|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
256 |
9 |
256 |
2e-85 |
202.7 |
73.4 |
82 |
| Subject |
519 |
112 |
519 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00133.1.g00720.1.sm.mk |
length: 256 aa. |
| IPR005835 |
Nucleotidyl transferase |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0009058 |
biosynthetic process |
|
|
| Molecular Function |
GO:0016779 |
nucleotidyltransferase activity |
|
|
| HMMPfam |
PF00483 |
NTP_transferase |
1.8e-17 |
9-101 |
| IPR005836 |
ADP-glucose pyrophosphorylase, conserved site |
| Biological Process |
GO:0005978 |
glycogen biosynthetic process |
|
|
| Molecular Function |
GO:0008878 |
glucose-1-phosphate adenylyltransferase activity |
|
|
| PatternScan |
PS00809 |
ADP_GLC_PYROPHOSPH_2 |
NA |
79-87 |
| no_ID |
|
| Gene3D |
G3DSA:2.160.10.10 |
no description |
1.6e-06 |
167-256 |
| Gene3D |
G3DSA:3.90.550.10 |
no description |
4.8e-10 |
9-97 |
| HMMPanther |
PTHR22572 |
SUGAR-1-PHOSPHATE |
3.8e-65 |
9-256 |
| HMMPanther |
PTHR22572:SF10 |
GLUCOSE-1-PHOSPHATE |
3.8e-65 |
9-256 |
| superfamily |
SSF53448 |
Nucleotide-diphospho-sugar |
8.6e-18 |
9-218 |
Pseudomolecule
No data.
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00133.1 |
maker_non_over |
exon |
438733 |
438756 |
. |
+ |
. |
ID=Zjn_sc00133.1.g00720.1.sm.mk:exon:1 |
| Zjn_sc00133.1 |
maker_non_over |
exon |
440303 |
440473 |
. |
+ |
. |
ID=Zjn_sc00133.1.g00720.1.sm.mk:exon:2 |
| Zjn_sc00133.1 |
maker_non_over |
exon |
440692 |
440781 |
. |
+ |
. |
ID=Zjn_sc00133.1.g00720.1.sm.mk:exon:3 |
| Zjn_sc00133.1 |
maker_non_over |
exon |
441025 |
441080 |
. |
+ |
. |
ID=Zjn_sc00133.1.g00720.1.sm.mk:exon:4 |
| Zjn_sc00133.1 |
maker_non_over |
exon |
441613 |
441685 |
. |
+ |
. |
ID=Zjn_sc00133.1.g00720.1.sm.mk:exon:5 |
| Zjn_sc00133.1 |
maker_non_over |
exon |
442083 |
442169 |
. |
+ |
. |
ID=Zjn_sc00133.1.g00720.1.sm.mk:exon:6 |
| Zjn_sc00133.1 |
maker_non_over |
exon |
442761 |
442867 |
. |
+ |
. |
ID=Zjn_sc00133.1.g00720.1.sm.mk:exon:7 |
| Zjn_sc00133.1 |
maker_non_over |
exon |
442957 |
443017 |
. |
+ |
. |
ID=Zjn_sc00133.1.g00720.1.sm.mk:exon:8 |
| Zjn_sc00133.1 |
maker_non_over |
exon |
443108 |
443209 |
. |
+ |
. |
ID=Zjn_sc00133.1.g00720.1.sm.mk:exon:9 |