Z. japonica Nagirizaki
Zjn_sc00129.1.g00470.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G48000.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 310 21 164 1e-60 78.4 32.6 40.6
Subject 243 31 173
Annot | Symbols: MYB112, AtMYB112 | myb domain protein 112 | chr1:17704269-17706377 REVERSE LENGTH=243
NR ref|XP_012700181.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 310 17 309 9e-85 115.8 58.7 69
Subject 359 35 353
Annot PREDICTED: transcriptional activator Myb [Setaria italica]
IRGSP Os03t0315400-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 310 20 155 1e-65 106.1 35.5 41.9
Subject 329 18 152
Annot
Sbicolor Sobic.009G032000.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 310 20 309 5e-75 153.9 51 62.9
Subject 477 191 471
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00129.1.g00470.1.sm.mk length: 310 aa.
IPR001005 SANT/Myb domain
method AccNumber shortName E-value location
Molecular Function GO:0003682 chromatin binding    
HMMPfam PF00249 Myb_DNA-binding 5.2e-11 24-71
77-121
HMMSmart SM00717 SANT 2.2e-12 23-73
76-125
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 2.8e-19 25-78
79-125
superfamily SSF46689 Homeodomain-like 7.3e-24 24-124
IPR017930 Myb domain
ProfileScan PS51294 HTH_MYB 14.993 19-75
76-127
no_ID  
HMMPanther PTHR10641 MYB-LIKE 3.8e-76 18-161
HMMPanther PTHR10641:SF199SUBFAMILY NOT 3.8e-76 18-161
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00129.1 maker_non_over exon 285332 285494 . + . ID=Zjn_sc00129.1.g00470.1.sm.mk:exon:1
Zjn_sc00129.1 maker_non_over exon 285778 286547 . + . ID=Zjn_sc00129.1.g00470.1.sm.mk:exon:2

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