Z. japonica Nagirizaki
Zjn_sc00128.1.g00580.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G49620.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 201 3 57 2e-24 159.7 22.9 25.4
Subject 321 116 170
Annot | Symbols: MYB78 | myb domain protein 78 | chr5:20137491-20139384 REVERSE LENGTH=321
NR ref|XP_004962755.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 201 3 201 6e-39 146.3 53.2 61.7
Subject 294 110 294
Annot PREDICTED: transcription factor MYB108-like [Setaria italica]
IRGSP Os11t0684000-01_chr11_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 201 3 201 3e-31 141.8 42.8 54.7
Subject 285 105 285
Annot
Sbicolor Sobic.008G131400.1.p|Chr08|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 201 3 57 1e-26 167.7 25.4 26.4
Subject 337 113 167
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00128.1.g00580.1.sm.mk length: 201 aa.
IPR001005 SANT/Myb domain
method AccNumber shortName E-value location
Molecular Function GO:0003682 chromatin binding    
HMMPfam PF00249 Myb_DNA-binding 8.5e-07 3-25
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 3.8e-10 3-26
superfamily SSF46689 Homeodomain-like 9.8e-07 3-41
IPR017930 Myb domain
ProfileScan PS51294 HTH_MYB 15.550 1-31
no_ID  
HMMPanther PTHR10641 MYB-LIKE 5.2e-23 3-58
HMMPanther PTHR10641:SF199SUBFAMILY NOT 5.2e-23 3-58
Pseudomolecule
Chromosome Start End Strand
1559869675987572-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00128.1 maker_non_over exon 337059 337664 . - . ID=Zjn_sc00128.1.g00580.1.sm.mk:exon:1

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