Z. japonica Nagirizaki
Zjn_sc00128.1.g00250.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G02730.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1224 11 1224 0.0 96.5 68.8 77.9
Subject 1181 11 1181
Annot | Symbols: ATCSLD5, CSLD5, SOS6 | cellulose synthase-like D5 | chr1:594697-598473 REVERSE LENGTH=1181
NR ref|XP_008661490.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1224 1 1224 0.0 99.4 89.4 92.6
Subject 1217 1 1217
Annot PREDICTED: uncharacterized protein LOC100216739 isoform X1 [Zea mays] gi|413916535|gb|AFW56467.1| putative cellulose synthase-like family protein [Zea mays]
IRGSP Os12t0555600-01_chr12_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1224 1 1224 0.0 99.3 84.1 89.2
Subject 1215 1 1215
Annot
Sbicolor Sobic.008G125700.1.p|Chr08|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1224 1 1224 0.0 100.1 89.6 92.9
Subject 1225 1 1225
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00128.1.g00250.1.sm.mk length: 1224 aa.
IPR005150 Cellulose synthase
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
Molecular Function GO:0016760 cellulose synthase (UDP-forming) activity    
Biological Process GO:0030244 cellulose biosynthetic process    
HMMPfam PF03552 Cellulose_synt 0 426-1210
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 9.1e-10 156-228
no_ID  
Coil coil coiled-coil NA 524-545
HMMPanther PTHR32287 FAMILY 0 166-1224
HMMPanther PTHR32287:SF3 SUBFAMILY 0 166-1224
HMMPfam PF14570 zf-RING_4 1.1e-10 178-212
Seg seg seg NA 145-157
213-239
261-271
300-313
470-481
554-570
572-585
790-800
1030-1051
1133-1143
Pseudomolecule
Chromosome Start End Strand
1558003895804385-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00128.1 maker_non_over exon 150481 152301 . - . ID=Zjn_sc00128.1.g00250.1.sm.mk:exon:3
Zjn_sc00128.1 maker_non_over exon 152394 153222 . - . ID=Zjn_sc00128.1.g00250.1.sm.mk:exon:2
Zjn_sc00128.1 maker_non_over exon 153453 154477 . - . ID=Zjn_sc00128.1.g00250.1.sm.mk:exon:1

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